Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
NFKB1P19838 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
NFKB1P19838 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
NFKB1P19838 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NFKB1P19838 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
NFKB1P19838 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
NFKB1P19838 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NFKB1P19838 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.55■□□□□ 0.4
NFKB1P19838 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NFKB1P19838 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NFKB1P19838 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.54■□□□□ 0.4
NFKB1P19838 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NFKB1P19838 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
NFKB1P19838 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NFKB1P19838 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.54■□□□□ 0.4
NFKB1P19838 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NFKB1P19838 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NFKB1P19838 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NFKB1P19838 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NFKB1P19838 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NFKB1P19838 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NFKB1P19838 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.54■□□□□ 0.4
NFKB1P19838 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
NFKB1P19838 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NFKB1P19838 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.54■□□□□ 0.4
NFKB1P19838 RBM17P3-201ENST00000417687 1192 ntBASIC17.54■□□□□ 0.4
NFKB1P19838 ACTG1P4-201ENST00000425123 1122 ntBASIC17.54■□□□□ 0.4
NFKB1P19838 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NFKB1P19838 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
NFKB1P19838 KRT18P56-201ENST00000507275 550 ntBASIC17.54■□□□□ 0.4
NFKB1P19838 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.54■□□□□ 0.4
NFKB1P19838 MTDHP3-201ENST00000594186 672 ntBASIC17.54■□□□□ 0.4
NFKB1P19838 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.54■□□□□ 0.4
NFKB1P19838 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NFKB1P19838 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NFKB1P19838 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NFKB1P19838 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NFKB1P19838 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NFKB1P19838 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.54■□□□□ 0.4
NFKB1P19838 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NFKB1P19838 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NFKB1P19838 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NFKB1P19838 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
NFKB1P19838 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NFKB1P19838 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NFKB1P19838 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
NFKB1P19838 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
NFKB1P19838 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NFKB1P19838 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NFKB1P19838 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NFKB1P19838 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
NFKB1P19838 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NFKB1P19838 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NFKB1P19838 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
NFKB1P19838 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NFKB1P19838 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NFKB1P19838 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NFKB1P19838 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
NFKB1P19838 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
NFKB1P19838 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
NFKB1P19838 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NFKB1P19838 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.53■□□□□ 0.4
NFKB1P19838 NKAPP1-205ENST00000585790 367 ntBASIC17.53■□□□□ 0.4
NFKB1P19838 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NFKB1P19838 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.53■□□□□ 0.4
NFKB1P19838 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.53■□□□□ 0.4
NFKB1P19838 AC092068.3-201ENST00000587894 2016 ntBASIC17.53■□□□□ 0.4
NFKB1P19838 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NFKB1P19838 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
NFKB1P19838 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NFKB1P19838 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
NFKB1P19838 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NFKB1P19838 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NFKB1P19838 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NFKB1P19838 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.53■□□□□ 0.4
NFKB1P19838 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NFKB1P19838 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NFKB1P19838 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NFKB1P19838 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.52■□□□□ 0.4
NFKB1P19838 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
NFKB1P19838 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NFKB1P19838 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
NFKB1P19838 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NFKB1P19838 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.52■□□□□ 0.4
NFKB1P19838 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NFKB1P19838 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
NFKB1P19838 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
NFKB1P19838 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
NFKB1P19838 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NFKB1P19838 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NFKB1P19838 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
NFKB1P19838 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.52■□□□□ 0.4
NFKB1P19838 AKR1C7P-201ENST00000305623 895 ntBASIC17.52■□□□□ 0.4
NFKB1P19838 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NFKB1P19838 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NFKB1P19838 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
NFKB1P19838 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
NFKB1P19838 LINC00982-205ENST00000420957 435 ntBASIC17.52■□□□□ 0.4
NFKB1P19838 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.52■□□□□ 0.4
NFKB1P19838 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms