Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRKCAP17252 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRKCAP17252 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PRKCAP17252 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRKCAP17252 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PRKCAP17252 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRKCAP17252 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.03■□□□□ 0.16
PRKCAP17252 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
PRKCAP17252 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
PRKCAP17252 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRKCAP17252 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRKCAP17252 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.03■□□□□ 0.16
PRKCAP17252 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRKCAP17252 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRKCAP17252 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRKCAP17252 AC005104.2-201ENST00000427818 678 ntBASIC16.03■□□□□ 0.16
PRKCAP17252 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PRKCAP17252 AC122714.2-201ENST00000502787 707 ntBASIC16.03■□□□□ 0.16
PRKCAP17252 AC096582.2-201ENST00000510860 516 ntBASIC16.03■□□□□ 0.16
PRKCAP17252 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.03■□□□□ 0.16
PRKCAP17252 AC099336.1-202ENST00000602961 463 ntBASIC16.03■□□□□ 0.16
PRKCAP17252 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PRKCAP17252 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
PRKCAP17252 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.03■□□□□ 0.16
PRKCAP17252 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PRKCAP17252 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRKCAP17252 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
PRKCAP17252 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PRKCAP17252 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.03■□□□□ 0.16
PRKCAP17252 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PRKCAP17252 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.03■□□□□ 0.16
PRKCAP17252 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.03■□□□□ 0.16
PRKCAP17252 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PRKCAP17252 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRKCAP17252 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PRKCAP17252 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRKCAP17252 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRKCAP17252 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRKCAP17252 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRKCAP17252 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.03■□□□□ 0.16
PRKCAP17252 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.03■□□□□ 0.16
PRKCAP17252 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PRKCAP17252 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PRKCAP17252 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PRKCAP17252 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.02■□□□□ 0.16
PRKCAP17252 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PRKCAP17252 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.02■□□□□ 0.16
PRKCAP17252 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
PRKCAP17252 HLA-J-201ENST00000462773 1622 ntBASIC16.02■□□□□ 0.16
PRKCAP17252 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.02■□□□□ 0.16
PRKCAP17252 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
PRKCAP17252 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PRKCAP17252 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PRKCAP17252 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.02■□□□□ 0.16
PRKCAP17252 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PRKCAP17252 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.02■□□□□ 0.16
PRKCAP17252 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.02■□□□□ 0.16
PRKCAP17252 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.02■□□□□ 0.16
PRKCAP17252 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.02■□□□□ 0.16
PRKCAP17252 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PRKCAP17252 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PRKCAP17252 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.02■□□□□ 0.15
PRKCAP17252 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
PRKCAP17252 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
PRKCAP17252 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.02■□□□□ 0.15
PRKCAP17252 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PRKCAP17252 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PRKCAP17252 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
PRKCAP17252 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRKCAP17252 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRKCAP17252 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PRKCAP17252 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRKCAP17252 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PRKCAP17252 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
PRKCAP17252 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.01■□□□□ 0.15
PRKCAP17252 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRKCAP17252 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PRKCAP17252 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRKCAP17252 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRKCAP17252 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PRKCAP17252 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRKCAP17252 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRKCAP17252 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.01■□□□□ 0.15
PRKCAP17252 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PRKCAP17252 POM121L3P-201ENST00000419331 1163 ntBASIC16.01■□□□□ 0.15
PRKCAP17252 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.01■□□□□ 0.15
PRKCAP17252 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.01■□□□□ 0.15
PRKCAP17252 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.01■□□□□ 0.15
PRKCAP17252 MIR3652-201ENST00000579335 131 ntBASIC16.01■□□□□ 0.15
PRKCAP17252 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.01■□□□□ 0.15
PRKCAP17252 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.01■□□□□ 0.15
PRKCAP17252 AC114341.1-201ENST00000618070 349 ntBASIC16.01■□□□□ 0.15
PRKCAP17252 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.01■□□□□ 0.15
PRKCAP17252 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.01■□□□□ 0.15
PRKCAP17252 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRKCAP17252 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRKCAP17252 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.01■□□□□ 0.15
PRKCAP17252 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.01■□□□□ 0.15
PRKCAP17252 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRKCAP17252 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms