Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDGFRAP16234 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
PDGFRAP16234 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDGFRAP16234 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDGFRAP16234 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDGFRAP16234 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
PDGFRAP16234 LINC02012-201ENST00000608206 1725 ntBASIC18.12■□□□□ 0.49
PDGFRAP16234 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
PDGFRAP16234 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDGFRAP16234 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.12■□□□□ 0.49
PDGFRAP16234 AL356309.3-201ENST00000624132 1934 ntBASIC18.11■□□□□ 0.49
PDGFRAP16234 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDGFRAP16234 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDGFRAP16234 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDGFRAP16234 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDGFRAP16234 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDGFRAP16234 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDGFRAP16234 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDGFRAP16234 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDGFRAP16234 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDGFRAP16234 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDGFRAP16234 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDGFRAP16234 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
PDGFRAP16234 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PDGFRAP16234 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PDGFRAP16234 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
PDGFRAP16234 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
PDGFRAP16234 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.11■□□□□ 0.49
PDGFRAP16234 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDGFRAP16234 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.11■□□□□ 0.49
PDGFRAP16234 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.11■□□□□ 0.49
PDGFRAP16234 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDGFRAP16234 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.11■□□□□ 0.49
PDGFRAP16234 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
PDGFRAP16234 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDGFRAP16234 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDGFRAP16234 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDGFRAP16234 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDGFRAP16234 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDGFRAP16234 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDGFRAP16234 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDGFRAP16234 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
PDGFRAP16234 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PDGFRAP16234 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDGFRAP16234 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDGFRAP16234 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDGFRAP16234 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDGFRAP16234 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDGFRAP16234 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDGFRAP16234 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDGFRAP16234 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDGFRAP16234 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.1■□□□□ 0.49
PDGFRAP16234 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDGFRAP16234 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDGFRAP16234 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.1■□□□□ 0.49
PDGFRAP16234 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDGFRAP16234 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.1■□□□□ 0.49
PDGFRAP16234 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.1■□□□□ 0.49
PDGFRAP16234 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDGFRAP16234 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.1■□□□□ 0.49
PDGFRAP16234 PRYP5-201ENST00000451909 266 ntBASIC18.1■□□□□ 0.49
PDGFRAP16234 FGFR3P6-201ENST00000457012 610 ntBASIC18.1■□□□□ 0.49
PDGFRAP16234 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
PDGFRAP16234 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.1■□□□□ 0.49
PDGFRAP16234 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.1■□□□□ 0.49
PDGFRAP16234 AL139288.1-201ENST00000623748 933 ntBASIC18.1■□□□□ 0.49
PDGFRAP16234 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.1■□□□□ 0.49
PDGFRAP16234 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDGFRAP16234 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
PDGFRAP16234 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDGFRAP16234 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.1■□□□□ 0.49
PDGFRAP16234 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDGFRAP16234 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDGFRAP16234 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDGFRAP16234 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PDGFRAP16234 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFRAP16234 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFRAP16234 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
PDGFRAP16234 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.09■□□□□ 0.49
PDGFRAP16234 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.09■□□□□ 0.49
PDGFRAP16234 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFRAP16234 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFRAP16234 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFRAP16234 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFRAP16234 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFRAP16234 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFRAP16234 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.09■□□□□ 0.49
PDGFRAP16234 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFRAP16234 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.09■□□□□ 0.49
PDGFRAP16234 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFRAP16234 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PDGFRAP16234 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
PDGFRAP16234 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFRAP16234 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFRAP16234 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.09■□□□□ 0.49
PDGFRAP16234 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFRAP16234 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.09■□□□□ 0.49
PDGFRAP16234 ACTG1P4-201ENST00000425123 1122 ntBASIC18.09■□□□□ 0.49
PDGFRAP16234 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.09■□□□□ 0.49
PDGFRAP16234 FDX1P1-201ENST00000449115 551 ntBASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms