Protein–RNA interactions for Protein: P0DN86

CGB3, Choriogonadotropin subunit beta 3, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB3P0DN86 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CGB3P0DN86 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CGB3P0DN86 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CGB3P0DN86 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.13□□□□□ -0.15
CGB3P0DN86 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
CGB3P0DN86 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CGB3P0DN86 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CGB3P0DN86 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CGB3P0DN86 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
CGB3P0DN86 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.13□□□□□ -0.15
CGB3P0DN86 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CGB3P0DN86 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CGB3P0DN86 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CGB3P0DN86 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CGB3P0DN86 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CGB3P0DN86 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.13□□□□□ -0.15
CGB3P0DN86 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CGB3P0DN86 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CGB3P0DN86 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.13□□□□□ -0.15
CGB3P0DN86 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CGB3P0DN86 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.13□□□□□ -0.15
CGB3P0DN86 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CGB3P0DN86 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.13□□□□□ -0.15
CGB3P0DN86 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CGB3P0DN86 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
CGB3P0DN86 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CGB3P0DN86 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.13□□□□□ -0.15
CGB3P0DN86 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.13□□□□□ -0.15
CGB3P0DN86 IFNL4P1-201ENST00000607083 540 ntBASIC14.13□□□□□ -0.15
CGB3P0DN86 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CGB3P0DN86 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CGB3P0DN86 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CGB3P0DN86 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CGB3P0DN86 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CGB3P0DN86 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CGB3P0DN86 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CGB3P0DN86 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.13□□□□□ -0.15
CGB3P0DN86 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.13□□□□□ -0.15
CGB3P0DN86 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CGB3P0DN86 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CGB3P0DN86 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CGB3P0DN86 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CGB3P0DN86 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CGB3P0DN86 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CGB3P0DN86 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CGB3P0DN86 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CGB3P0DN86 AC011676.5-201ENST00000624864 2660 ntBASIC14.12□□□□□ -0.15
CGB3P0DN86 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CGB3P0DN86 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CGB3P0DN86 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.12□□□□□ -0.15
CGB3P0DN86 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
CGB3P0DN86 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CGB3P0DN86 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.12□□□□□ -0.15
CGB3P0DN86 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.12□□□□□ -0.15
CGB3P0DN86 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CGB3P0DN86 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CGB3P0DN86 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CGB3P0DN86 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.12□□□□□ -0.15
CGB3P0DN86 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CGB3P0DN86 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.12□□□□□ -0.15
CGB3P0DN86 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CGB3P0DN86 SCARNA2-201ENST00000458748 420 ntBASIC14.12□□□□□ -0.15
CGB3P0DN86 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CGB3P0DN86 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.12□□□□□ -0.15
CGB3P0DN86 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.12□□□□□ -0.15
CGB3P0DN86 AC021087.4-201ENST00000563761 564 ntBASIC14.12□□□□□ -0.15
CGB3P0DN86 AC139887.3-201ENST00000568585 713 ntBASIC14.12□□□□□ -0.15
CGB3P0DN86 AL139424.1-201ENST00000607572 797 ntBASIC14.12□□□□□ -0.15
CGB3P0DN86 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CGB3P0DN86 AC004706.3-202ENST00000621574 984 ntBASIC14.12□□□□□ -0.15
CGB3P0DN86 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
CGB3P0DN86 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CGB3P0DN86 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CGB3P0DN86 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CGB3P0DN86 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CGB3P0DN86 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CGB3P0DN86 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.12□□□□□ -0.15
CGB3P0DN86 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.12□□□□□ -0.15
CGB3P0DN86 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.12□□□□□ -0.15
CGB3P0DN86 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CGB3P0DN86 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.12□□□□□ -0.15
CGB3P0DN86 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CGB3P0DN86 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.12□□□□□ -0.15
CGB3P0DN86 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CGB3P0DN86 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CGB3P0DN86 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.12□□□□□ -0.15
CGB3P0DN86 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CGB3P0DN86 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CGB3P0DN86 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CGB3P0DN86 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.11□□□□□ -0.15
CGB3P0DN86 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
CGB3P0DN86 DUSP5P1-201ENST00000441325 1139 ntBASIC14.11□□□□□ -0.15
CGB3P0DN86 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.11□□□□□ -0.15
CGB3P0DN86 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.11□□□□□ -0.15
CGB3P0DN86 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.11□□□□□ -0.15
CGB3P0DN86 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.11□□□□□ -0.15
CGB3P0DN86 TERC-201ENST00000602385 541 ntBASIC14.11□□□□□ -0.15
CGB3P0DN86 AC025062.2-201ENST00000605477 670 ntBASIC14.11□□□□□ -0.15
CGB3P0DN86 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC14.11□□□□□ -0.15
CGB3P0DN86 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms