Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB40ALP0C0E4 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB40ALP0C0E4 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RAB40ALP0C0E4 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB40ALP0C0E4 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAB40ALP0C0E4 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.26■□□□□ 0.19
RAB40ALP0C0E4 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB40ALP0C0E4 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAB40ALP0C0E4 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB40ALP0C0E4 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB40ALP0C0E4 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
RAB40ALP0C0E4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB40ALP0C0E4 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB40ALP0C0E4 AL590787.1-201ENST00000568856 1315 ntBASIC16.25■□□□□ 0.19
RAB40ALP0C0E4 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
RAB40ALP0C0E4 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB40ALP0C0E4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.25■□□□□ 0.19
RAB40ALP0C0E4 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RAB40ALP0C0E4 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.25■□□□□ 0.19
RAB40ALP0C0E4 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.25■□□□□ 0.19
RAB40ALP0C0E4 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB40ALP0C0E4 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
RAB40ALP0C0E4 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB40ALP0C0E4 IGLL3P-201ENST00000412472 434 ntBASIC16.25■□□□□ 0.19
RAB40ALP0C0E4 RPS8P6-201ENST00000426177 609 ntBASIC16.25■□□□□ 0.19
RAB40ALP0C0E4 MKNK2P1-201ENST00000437526 628 ntBASIC16.25■□□□□ 0.19
RAB40ALP0C0E4 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.25■□□□□ 0.19
RAB40ALP0C0E4 AC018845.2-201ENST00000568326 409 ntBASIC16.25■□□□□ 0.19
RAB40ALP0C0E4 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.25■□□□□ 0.19
RAB40ALP0C0E4 LINC01451-201ENST00000623792 534 ntBASIC16.25■□□□□ 0.19
RAB40ALP0C0E4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB40ALP0C0E4 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB40ALP0C0E4 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RAB40ALP0C0E4 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB40ALP0C0E4 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RAB40ALP0C0E4 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB40ALP0C0E4 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.25■□□□□ 0.19
RAB40ALP0C0E4 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB40ALP0C0E4 AC134043.2-201ENST00000624206 2238 ntBASIC16.25■□□□□ 0.19
RAB40ALP0C0E4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40ALP0C0E4 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40ALP0C0E4 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40ALP0C0E4 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.24■□□□□ 0.19
RAB40ALP0C0E4 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40ALP0C0E4 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40ALP0C0E4 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
RAB40ALP0C0E4 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40ALP0C0E4 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40ALP0C0E4 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.24■□□□□ 0.19
RAB40ALP0C0E4 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.24■□□□□ 0.19
RAB40ALP0C0E4 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40ALP0C0E4 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.24■□□□□ 0.19
RAB40ALP0C0E4 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RAB40ALP0C0E4 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40ALP0C0E4 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.24■□□□□ 0.19
RAB40ALP0C0E4 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.24■□□□□ 0.19
RAB40ALP0C0E4 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.24■□□□□ 0.19
RAB40ALP0C0E4 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.24■□□□□ 0.19
RAB40ALP0C0E4 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.24■□□□□ 0.19
RAB40ALP0C0E4 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40ALP0C0E4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40ALP0C0E4 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
RAB40ALP0C0E4 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.24■□□□□ 0.19
RAB40ALP0C0E4 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40ALP0C0E4 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
RAB40ALP0C0E4 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40ALP0C0E4 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40ALP0C0E4 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.24■□□□□ 0.19
RAB40ALP0C0E4 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.24■□□□□ 0.19
RAB40ALP0C0E4 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40ALP0C0E4 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40ALP0C0E4 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40ALP0C0E4 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40ALP0C0E4 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40ALP0C0E4 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.24■□□□□ 0.19
RAB40ALP0C0E4 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40ALP0C0E4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB40ALP0C0E4 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RAB40ALP0C0E4 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAB40ALP0C0E4 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RAB40ALP0C0E4 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
RAB40ALP0C0E4 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.23■□□□□ 0.19
RAB40ALP0C0E4 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RAB40ALP0C0E4 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAB40ALP0C0E4 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RAB40ALP0C0E4 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAB40ALP0C0E4 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAB40ALP0C0E4 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
RAB40ALP0C0E4 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAB40ALP0C0E4 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAB40ALP0C0E4 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAB40ALP0C0E4 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
RAB40ALP0C0E4 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAB40ALP0C0E4 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.23■□□□□ 0.19
RAB40ALP0C0E4 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.23■□□□□ 0.19
RAB40ALP0C0E4 RHOQP3-201ENST00000437982 621 ntBASIC16.23■□□□□ 0.19
RAB40ALP0C0E4 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.23■□□□□ 0.19
RAB40ALP0C0E4 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.23■□□□□ 0.19
RAB40ALP0C0E4 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.23■□□□□ 0.19
RAB40ALP0C0E4 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms