Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
CHGBP05060 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHGBP05060 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHGBP05060 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHGBP05060 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC20.67■□□□□ 0.9
CHGBP05060 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC20.67■□□□□ 0.9
CHGBP05060 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHGBP05060 DUX4L17-201ENST00000557360 1267 ntBASIC20.67■□□□□ 0.9
CHGBP05060 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.67■□□□□ 0.9
CHGBP05060 AC140113.2-201ENST00000604370 208 ntBASIC20.67■□□□□ 0.9
CHGBP05060 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC20.67■□□□□ 0.9
CHGBP05060 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHGBP05060 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.67■□□□□ 0.9
CHGBP05060 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHGBP05060 FRMD8P1-201ENST00000440433 1524 ntBASIC20.67■□□□□ 0.9
CHGBP05060 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHGBP05060 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHGBP05060 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC20.67■□□□□ 0.9
CHGBP05060 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHGBP05060 LINC02012-201ENST00000608206 1725 ntBASIC20.67■□□□□ 0.9
CHGBP05060 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CHGBP05060 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHGBP05060 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC20.66■□□□□ 0.9
CHGBP05060 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC20.66■□□□□ 0.9
CHGBP05060 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHGBP05060 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHGBP05060 AP002414.1-201ENST00000391405 1147 ntBASIC20.66■□□□□ 0.9
CHGBP05060 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
CHGBP05060 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC20.66■□□□□ 0.9
CHGBP05060 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHGBP05060 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.66■□□□□ 0.9
CHGBP05060 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CHGBP05060 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHGBP05060 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHGBP05060 STX3-203ENST00000529177 1571 ntTSL 2 BASIC20.66■□□□□ 0.9
CHGBP05060 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHGBP05060 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.66■□□□□ 0.9
CHGBP05060 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC20.66■□□□□ 0.9
CHGBP05060 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHGBP05060 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CHGBP05060 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHGBP05060 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.66■□□□□ 0.9
CHGBP05060 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.65■□□□□ 0.9
CHGBP05060 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHGBP05060 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHGBP05060 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CHGBP05060 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHGBP05060 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CHGBP05060 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHGBP05060 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.65■□□□□ 0.9
CHGBP05060 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHGBP05060 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHGBP05060 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC20.65■□□□□ 0.9
CHGBP05060 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHGBP05060 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC20.65■□□□□ 0.9
CHGBP05060 POLD4-207ENST00000531239 584 ntTSL 2 BASIC20.65■□□□□ 0.9
CHGBP05060 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC20.65■□□□□ 0.9
CHGBP05060 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHGBP05060 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHGBP05060 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHGBP05060 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHGBP05060 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC20.65■□□□□ 0.9
CHGBP05060 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC20.65■□□□□ 0.9
CHGBP05060 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CHGBP05060 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC20.64■□□□□ 0.9
CHGBP05060 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC20.64■□□□□ 0.9
CHGBP05060 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CHGBP05060 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CHGBP05060 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CHGBP05060 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC20.64■□□□□ 0.9
CHGBP05060 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.64■□□□□ 0.89
CHGBP05060 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CHGBP05060 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CHGBP05060 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHGBP05060 AC087163.2-201ENST00000457299 853 ntBASIC20.64■□□□□ 0.89
CHGBP05060 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.64■□□□□ 0.89
CHGBP05060 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC20.64■□□□□ 0.89
CHGBP05060 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHGBP05060 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHGBP05060 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CHGBP05060 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHGBP05060 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC20.64■□□□□ 0.89
CHGBP05060 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHGBP05060 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHGBP05060 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CHGBP05060 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHGBP05060 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CHGBP05060 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHGBP05060 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHGBP05060 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.63■□□□□ 0.89
CHGBP05060 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CHGBP05060 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHGBP05060 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHGBP05060 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHGBP05060 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHGBP05060 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20.63■□□□□ 0.89
CHGBP05060 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.63■□□□□ 0.89
CHGBP05060 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.63■□□□□ 0.89
CHGBP05060 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC20.63■□□□□ 0.89
CHGBP05060 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms