Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.52□□□□□ -0.09
CD74P04233 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC14.52□□□□□ -0.09
CD74P04233 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC14.52□□□□□ -0.09
CD74P04233 IRX5-204ENST00000560154 879 ntTSL 5 BASIC14.52□□□□□ -0.09
CD74P04233 AP003071.4-201ENST00000562276 1284 ntBASIC14.52□□□□□ -0.09
CD74P04233 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.52□□□□□ -0.09
CD74P04233 AL512604.3-201ENST00000569583 964 ntBASIC14.52□□□□□ -0.09
CD74P04233 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CD74P04233 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC14.52□□□□□ -0.09
CD74P04233 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CD74P04233 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CD74P04233 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CD74P04233 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CD74P04233 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
CD74P04233 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CD74P04233 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CD74P04233 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.52□□□□□ -0.09
CD74P04233 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.52□□□□□ -0.09
CD74P04233 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CD74P04233 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.52□□□□□ -0.09
CD74P04233 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CD74P04233 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CD74P04233 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CD74P04233 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD74P04233 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD74P04233 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD74P04233 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CD74P04233 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CD74P04233 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD74P04233 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.51□□□□□ -0.09
CD74P04233 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CD74P04233 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD74P04233 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD74P04233 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.51□□□□□ -0.09
CD74P04233 AL391256.1-201ENST00000443260 1855 ntBASIC14.51□□□□□ -0.09
CD74P04233 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD74P04233 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD74P04233 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD74P04233 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC14.51□□□□□ -0.09
CD74P04233 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CD74P04233 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CD74P04233 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD74P04233 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CD74P04233 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD74P04233 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC14.51□□□□□ -0.09
CD74P04233 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.51□□□□□ -0.09
CD74P04233 AC019129.2-201ENST00000609837 1235 ntBASIC14.51□□□□□ -0.09
CD74P04233 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC14.51□□□□□ -0.09
CD74P04233 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.51□□□□□ -0.09
CD74P04233 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CD74P04233 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CD74P04233 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.51□□□□□ -0.09
CD74P04233 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.51□□□□□ -0.09
CD74P04233 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD74P04233 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD74P04233 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD74P04233 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CD74P04233 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CD74P04233 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CD74P04233 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CD74P04233 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CD74P04233 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD74P04233 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC14.5□□□□□ -0.09
CD74P04233 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD74P04233 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD74P04233 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD74P04233 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC14.5□□□□□ -0.09
CD74P04233 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD74P04233 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.5□□□□□ -0.09
CD74P04233 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CD74P04233 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC14.5□□□□□ -0.09
CD74P04233 MTCL1P1-201ENST00000446207 792 ntBASIC14.5□□□□□ -0.09
CD74P04233 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC14.5□□□□□ -0.09
CD74P04233 IGHV3-52-201ENST00000519770 353 ntBASIC14.5□□□□□ -0.09
CD74P04233 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.5□□□□□ -0.09
CD74P04233 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC14.5□□□□□ -0.09
CD74P04233 EGLN1P1-201ENST00000531623 762 ntBASIC14.5□□□□□ -0.09
CD74P04233 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC14.5□□□□□ -0.09
CD74P04233 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC14.5□□□□□ -0.09
CD74P04233 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC14.5□□□□□ -0.09
CD74P04233 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD74P04233 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC14.5□□□□□ -0.09
CD74P04233 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC14.5□□□□□ -0.09
CD74P04233 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD74P04233 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD74P04233 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD74P04233 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD74P04233 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD74P04233 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD74P04233 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CD74P04233 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.5□□□□□ -0.09
CD74P04233 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
CD74P04233 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD74P04233 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD74P04233 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD74P04233 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD74P04233 AL645728.1-201ENST00000366221 2101 ntBASIC14.5□□□□□ -0.09
CD74P04233 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CD74P04233 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CD74P04233 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms