Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13.7□□□□□ -0.22
IFNA1P01562 AC104640.1-201ENST00000562617 2109 ntBASIC13.7□□□□□ -0.22
IFNA1P01562 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
IFNA1P01562 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
IFNA1P01562 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
IFNA1P01562 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
IFNA1P01562 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
IFNA1P01562 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
IFNA1P01562 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
IFNA1P01562 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
IFNA1P01562 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
IFNA1P01562 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IFNA1P01562 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC13.69□□□□□ -0.22
IFNA1P01562 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IFNA1P01562 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
IFNA1P01562 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC13.69□□□□□ -0.22
IFNA1P01562 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IFNA1P01562 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
IFNA1P01562 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
IFNA1P01562 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
IFNA1P01562 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IFNA1P01562 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
IFNA1P01562 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IFNA1P01562 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC13.69□□□□□ -0.22
IFNA1P01562 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
IFNA1P01562 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC13.69□□□□□ -0.22
IFNA1P01562 TBC1D3P2-202ENST00000577902 1649 ntBASIC13.69□□□□□ -0.22
IFNA1P01562 AC099063.4-201ENST00000641099 1602 ntBASIC13.69□□□□□ -0.22
IFNA1P01562 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC13.69□□□□□ -0.22
IFNA1P01562 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
IFNA1P01562 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IFNA1P01562 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IFNA1P01562 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IFNA1P01562 GUK1-205ENST00000366722 850 ntTSL 3 BASIC13.69□□□□□ -0.22
IFNA1P01562 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC13.69□□□□□ -0.22
IFNA1P01562 KRT18P5-201ENST00000436075 1291 ntBASIC13.69□□□□□ -0.22
IFNA1P01562 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC13.69□□□□□ -0.22
IFNA1P01562 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC13.69□□□□□ -0.22
IFNA1P01562 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
IFNA1P01562 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
IFNA1P01562 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC13.69□□□□□ -0.22
IFNA1P01562 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IFNA1P01562 AC092850.2-201ENST00000623821 2697 ntBASIC13.69□□□□□ -0.22
IFNA1P01562 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
IFNA1P01562 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IFNA1P01562 AL662844.4-201ENST00000606367 2838 ntBASIC13.69□□□□□ -0.22
IFNA1P01562 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
IFNA1P01562 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
IFNA1P01562 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
IFNA1P01562 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
IFNA1P01562 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
IFNA1P01562 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
IFNA1P01562 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
IFNA1P01562 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
IFNA1P01562 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IFNA1P01562 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IFNA1P01562 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
IFNA1P01562 AC067750.1-201ENST00000608826 6545 ntBASIC13.69□□□□□ -0.22
IFNA1P01562 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.69□□□□□ -0.22
IFNA1P01562 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
IFNA1P01562 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IFNA1P01562 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.68□□□□□ -0.22
IFNA1P01562 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
IFNA1P01562 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IFNA1P01562 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.68□□□□□ -0.22
IFNA1P01562 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IFNA1P01562 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC13.68□□□□□ -0.22
IFNA1P01562 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC13.68□□□□□ -0.22
IFNA1P01562 MED29-202ENST00000594368 1471 ntTSL 2 BASIC13.68□□□□□ -0.22
IFNA1P01562 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IFNA1P01562 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
IFNA1P01562 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
IFNA1P01562 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
IFNA1P01562 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
IFNA1P01562 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
IFNA1P01562 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IFNA1P01562 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
IFNA1P01562 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
IFNA1P01562 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IFNA1P01562 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IFNA1P01562 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IFNA1P01562 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
IFNA1P01562 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC13.68□□□□□ -0.22
IFNA1P01562 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC13.68□□□□□ -0.22
IFNA1P01562 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC13.68□□□□□ -0.22
IFNA1P01562 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC13.68□□□□□ -0.22
IFNA1P01562 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
IFNA1P01562 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
IFNA1P01562 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IFNA1P01562 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC13.68□□□□□ -0.22
IFNA1P01562 AL365203.3-201ENST00000609742 2057 ntBASIC13.68□□□□□ -0.22
IFNA1P01562 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
IFNA1P01562 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
IFNA1P01562 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IFNA1P01562 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IFNA1P01562 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
IFNA1P01562 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
IFNA1P01562 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC13.67□□□□□ -0.22
IFNA1P01562 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
IFNA1P01562 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms