Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 MTDHP1-201ENST00000605323 784 ntBASIC14.48□□□□□ -0.09
SIX6O95475 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SIX6O95475 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC14.48□□□□□ -0.09
SIX6O95475 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SIX6O95475 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SIX6O95475 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.48□□□□□ -0.09
SIX6O95475 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SIX6O95475 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SIX6O95475 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SIX6O95475 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SIX6O95475 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC14.47□□□□□ -0.09
SIX6O95475 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SIX6O95475 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC14.47□□□□□ -0.09
SIX6O95475 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.47□□□□□ -0.09
SIX6O95475 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SIX6O95475 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SIX6O95475 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.47□□□□□ -0.09
SIX6O95475 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SIX6O95475 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SIX6O95475 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SIX6O95475 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SIX6O95475 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC14.47□□□□□ -0.09
SIX6O95475 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.47□□□□□ -0.09
SIX6O95475 ALOX12P2-203ENST00000570921 1945 ntBASIC14.47□□□□□ -0.09
SIX6O95475 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SIX6O95475 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SIX6O95475 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SIX6O95475 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SIX6O95475 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SIX6O95475 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SIX6O95475 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SIX6O95475 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SIX6O95475 MED29-202ENST00000594368 1471 ntTSL 2 BASIC14.47□□□□□ -0.09
SIX6O95475 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SIX6O95475 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SIX6O95475 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SIX6O95475 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SIX6O95475 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SIX6O95475 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC14.47□□□□□ -0.09
SIX6O95475 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SIX6O95475 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SIX6O95475 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC14.47□□□□□ -0.09
SIX6O95475 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC14.47□□□□□ -0.09
SIX6O95475 MIR4674-201ENST00000582457 87 ntBASIC14.47□□□□□ -0.09
SIX6O95475 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC14.47□□□□□ -0.09
SIX6O95475 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC14.47□□□□□ -0.09
SIX6O95475 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.47□□□□□ -0.09
SIX6O95475 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SIX6O95475 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.47□□□□□ -0.09
SIX6O95475 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
SIX6O95475 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SIX6O95475 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.47□□□□□ -0.09
SIX6O95475 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SIX6O95475 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SIX6O95475 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.47□□□□□ -0.09
SIX6O95475 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC14.47□□□□□ -0.09
SIX6O95475 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SIX6O95475 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SIX6O95475 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
SIX6O95475 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SIX6O95475 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC14.46□□□□□ -0.09
SIX6O95475 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SIX6O95475 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SIX6O95475 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SIX6O95475 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.46□□□□□ -0.09
SIX6O95475 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SIX6O95475 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SIX6O95475 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SIX6O95475 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SIX6O95475 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.46□□□□□ -0.09
SIX6O95475 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SIX6O95475 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.46□□□□□ -0.09
SIX6O95475 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SIX6O95475 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SIX6O95475 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SIX6O95475 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SIX6O95475 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SIX6O95475 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SIX6O95475 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SIX6O95475 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
SIX6O95475 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC14.46□□□□□ -0.09
SIX6O95475 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
SIX6O95475 KRASP1-201ENST00000407852 552 ntBASIC14.46□□□□□ -0.09
SIX6O95475 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC14.46□□□□□ -0.09
SIX6O95475 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SIX6O95475 CDCA4P2-201ENST00000441182 718 ntBASIC14.46□□□□□ -0.09
SIX6O95475 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
SIX6O95475 AC011506.1-201ENST00000474329 610 ntBASIC14.46□□□□□ -0.09
SIX6O95475 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC14.46□□□□□ -0.09
SIX6O95475 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC14.46□□□□□ -0.09
SIX6O95475 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC14.46□□□□□ -0.09
SIX6O95475 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SIX6O95475 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SIX6O95475 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SIX6O95475 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SIX6O95475 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.46□□□□□ -0.09
SIX6O95475 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SIX6O95475 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.46□□□□□ -0.1
SIX6O95475 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.46□□□□□ -0.1
SIX6O95475 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms