Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLDN11O75508 AL023806.1-201ENST00000603994 1649 ntBASIC17.58■□□□□ 0.4
CLDN11O75508 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CLDN11O75508 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
CLDN11O75508 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN11O75508 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.57■□□□□ 0.4
CLDN11O75508 AC141586.5-201ENST00000624546 2050 ntBASIC17.57■□□□□ 0.4
CLDN11O75508 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN11O75508 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN11O75508 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CLDN11O75508 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CLDN11O75508 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.57■□□□□ 0.4
CLDN11O75508 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN11O75508 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.57■□□□□ 0.4
CLDN11O75508 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN11O75508 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN11O75508 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN11O75508 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN11O75508 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CLDN11O75508 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CLDN11O75508 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.57■□□□□ 0.4
CLDN11O75508 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.57■□□□□ 0.4
CLDN11O75508 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
CLDN11O75508 AL671883.3-201ENST00000603274 991 ntBASIC17.57■□□□□ 0.4
CLDN11O75508 AC140113.2-201ENST00000604370 208 ntBASIC17.57■□□□□ 0.4
CLDN11O75508 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN11O75508 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN11O75508 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN11O75508 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CLDN11O75508 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN11O75508 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.57■□□□□ 0.4
CLDN11O75508 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.57■□□□□ 0.4
CLDN11O75508 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.57■□□□□ 0.4
CLDN11O75508 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN11O75508 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN11O75508 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.57■□□□□ 0.4
CLDN11O75508 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN11O75508 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN11O75508 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN11O75508 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN11O75508 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN11O75508 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN11O75508 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.56■□□□□ 0.4
CLDN11O75508 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
CLDN11O75508 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
CLDN11O75508 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN11O75508 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.56■□□□□ 0.4
CLDN11O75508 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN11O75508 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN11O75508 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN11O75508 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CLDN11O75508 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.56■□□□□ 0.4
CLDN11O75508 AC087163.2-201ENST00000457299 853 ntBASIC17.56■□□□□ 0.4
CLDN11O75508 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.56■□□□□ 0.4
CLDN11O75508 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CLDN11O75508 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN11O75508 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN11O75508 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CLDN11O75508 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.56■□□□□ 0.4
CLDN11O75508 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CLDN11O75508 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.56■□□□□ 0.4
CLDN11O75508 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CLDN11O75508 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.56■□□□□ 0.4
CLDN11O75508 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CLDN11O75508 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN11O75508 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CLDN11O75508 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.56■□□□□ 0.4
CLDN11O75508 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN11O75508 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN11O75508 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN11O75508 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN11O75508 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.55■□□□□ 0.4
CLDN11O75508 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CLDN11O75508 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.55■□□□□ 0.4
CLDN11O75508 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN11O75508 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CLDN11O75508 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN11O75508 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN11O75508 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.55■□□□□ 0.4
CLDN11O75508 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN11O75508 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN11O75508 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN11O75508 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
CLDN11O75508 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN11O75508 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.55■□□□□ 0.4
CLDN11O75508 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.55■□□□□ 0.4
CLDN11O75508 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.55■□□□□ 0.4
CLDN11O75508 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN11O75508 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.55■□□□□ 0.4
CLDN11O75508 KRT18P3-201ENST00000451602 1288 ntBASIC17.55■□□□□ 0.4
CLDN11O75508 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.55■□□□□ 0.4
CLDN11O75508 RNA5SP416-201ENST00000516838 111 ntBASIC17.55■□□□□ 0.4
CLDN11O75508 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.55■□□□□ 0.4
CLDN11O75508 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.55■□□□□ 0.4
CLDN11O75508 OR7E47P-204ENST00000575924 449 ntBASIC17.55■□□□□ 0.4
CLDN11O75508 AC064836.3-201ENST00000607928 673 ntBASIC17.55■□□□□ 0.4
CLDN11O75508 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN11O75508 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN11O75508 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN11O75508 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms