Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.5■□□□□ 0.23
LCMT2O60294 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
LCMT2O60294 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.5■□□□□ 0.23
LCMT2O60294 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LCMT2O60294 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LCMT2O60294 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LCMT2O60294 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LCMT2O60294 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LCMT2O60294 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
LCMT2O60294 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LCMT2O60294 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LCMT2O60294 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
LCMT2O60294 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LCMT2O60294 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
LCMT2O60294 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LCMT2O60294 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LCMT2O60294 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LCMT2O60294 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.49■□□□□ 0.23
LCMT2O60294 LAGE3P1-201ENST00000425356 484 ntBASIC16.49■□□□□ 0.23
LCMT2O60294 EGFEM1P-202ENST00000431685 1563 ntBASIC16.49■□□□□ 0.23
LCMT2O60294 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
LCMT2O60294 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LCMT2O60294 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
LCMT2O60294 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.49■□□□□ 0.23
LCMT2O60294 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LCMT2O60294 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LCMT2O60294 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.49■□□□□ 0.23
LCMT2O60294 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.49■□□□□ 0.23
LCMT2O60294 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.49■□□□□ 0.23
LCMT2O60294 AC006504.4-201ENST00000592118 1568 ntBASIC16.49■□□□□ 0.23
LCMT2O60294 AL049840.3-201ENST00000602669 611 ntBASIC16.49■□□□□ 0.23
LCMT2O60294 AL139424.1-201ENST00000607572 797 ntBASIC16.49■□□□□ 0.23
LCMT2O60294 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
LCMT2O60294 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.49■□□□□ 0.23
LCMT2O60294 FAM215A-202ENST00000632077 792 ntBASIC16.49■□□□□ 0.23
LCMT2O60294 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.49■□□□□ 0.23
LCMT2O60294 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.49■□□□□ 0.23
LCMT2O60294 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LCMT2O60294 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LCMT2O60294 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LCMT2O60294 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.49■□□□□ 0.23
LCMT2O60294 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LCMT2O60294 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.49■□□□□ 0.23
LCMT2O60294 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.49■□□□□ 0.23
LCMT2O60294 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LCMT2O60294 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
LCMT2O60294 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LCMT2O60294 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LCMT2O60294 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
LCMT2O60294 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
LCMT2O60294 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LCMT2O60294 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
LCMT2O60294 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LCMT2O60294 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LCMT2O60294 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LCMT2O60294 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LCMT2O60294 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LCMT2O60294 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
LCMT2O60294 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.48■□□□□ 0.23
LCMT2O60294 AL031284.1-201ENST00000419297 478 ntBASIC16.48■□□□□ 0.23
LCMT2O60294 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
LCMT2O60294 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.48■□□□□ 0.23
LCMT2O60294 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.48■□□□□ 0.23
LCMT2O60294 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LCMT2O60294 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.48■□□□□ 0.23
LCMT2O60294 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.48■□□□□ 0.23
LCMT2O60294 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LCMT2O60294 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.48■□□□□ 0.23
LCMT2O60294 AL773604.1-201ENST00000617417 272 ntBASIC16.48■□□□□ 0.23
LCMT2O60294 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LCMT2O60294 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LCMT2O60294 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.48■□□□□ 0.23
LCMT2O60294 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
LCMT2O60294 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
LCMT2O60294 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.48■□□□□ 0.23
LCMT2O60294 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LCMT2O60294 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LCMT2O60294 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.48■□□□□ 0.23
LCMT2O60294 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LCMT2O60294 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
LCMT2O60294 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LCMT2O60294 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LCMT2O60294 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
LCMT2O60294 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.47■□□□□ 0.23
LCMT2O60294 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LCMT2O60294 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
LCMT2O60294 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
LCMT2O60294 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LCMT2O60294 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
LCMT2O60294 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LCMT2O60294 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LCMT2O60294 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LCMT2O60294 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.47■□□□□ 0.23
LCMT2O60294 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.47■□□□□ 0.23
LCMT2O60294 AC073621.1-201ENST00000392730 636 ntBASIC16.47■□□□□ 0.23
LCMT2O60294 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LCMT2O60294 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LCMT2O60294 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.47■□□□□ 0.23
LCMT2O60294 KRT18P27-201ENST00000427733 1299 ntBASIC16.47■□□□□ 0.23
LCMT2O60294 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms