Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MSI1O43347 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.9■□□□□ 0.46
MSI1O43347 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.9■□□□□ 0.46
MSI1O43347 AC093525.9-201ENST00000624961 1746 ntBASIC17.89■□□□□ 0.46
MSI1O43347 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
MSI1O43347 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.89■□□□□ 0.45
MSI1O43347 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
MSI1O43347 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
MSI1O43347 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
MSI1O43347 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.89■□□□□ 0.45
MSI1O43347 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
MSI1O43347 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
MSI1O43347 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
MSI1O43347 MIR574-201ENST00000385209 96 ntBASIC17.89■□□□□ 0.45
MSI1O43347 MIR940-201ENST00000401276 94 ntBASIC17.89■□□□□ 0.45
MSI1O43347 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.89■□□□□ 0.45
MSI1O43347 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.89■□□□□ 0.45
MSI1O43347 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
MSI1O43347 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.89■□□□□ 0.45
MSI1O43347 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
MSI1O43347 IGHV3-65-201ENST00000523210 341 ntBASIC17.89■□□□□ 0.45
MSI1O43347 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.89■□□□□ 0.45
MSI1O43347 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.89■□□□□ 0.45
MSI1O43347 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.89■□□□□ 0.45
MSI1O43347 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.89■□□□□ 0.45
MSI1O43347 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.89■□□□□ 0.45
MSI1O43347 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
MSI1O43347 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.89■□□□□ 0.45
MSI1O43347 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
MSI1O43347 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MSI1O43347 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
MSI1O43347 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MSI1O43347 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.89■□□□□ 0.45
MSI1O43347 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MSI1O43347 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.89■□□□□ 0.45
MSI1O43347 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.89■□□□□ 0.45
MSI1O43347 PI4KAP1-204ENST00000612579 1703 ntBASIC17.89■□□□□ 0.45
MSI1O43347 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MSI1O43347 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.89■□□□□ 0.45
MSI1O43347 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
MSI1O43347 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
MSI1O43347 AC016396.2-201ENST00000562575 1417 ntBASIC17.89■□□□□ 0.45
MSI1O43347 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
MSI1O43347 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.89■□□□□ 0.45
MSI1O43347 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MSI1O43347 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.88■□□□□ 0.45
MSI1O43347 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
MSI1O43347 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MSI1O43347 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.88■□□□□ 0.45
MSI1O43347 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.88■□□□□ 0.45
MSI1O43347 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MSI1O43347 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MSI1O43347 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MSI1O43347 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MSI1O43347 AC116353.5-201ENST00000638148 1699 ntBASIC17.88■□□□□ 0.45
MSI1O43347 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
MSI1O43347 AP002414.1-201ENST00000391405 1147 ntBASIC17.88■□□□□ 0.45
MSI1O43347 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.88■□□□□ 0.45
MSI1O43347 AC007967.2-201ENST00000432613 625 ntBASIC17.88■□□□□ 0.45
MSI1O43347 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.88■□□□□ 0.45
MSI1O43347 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.88■□□□□ 0.45
MSI1O43347 POLD2P1-201ENST00000511220 997 ntBASIC17.88■□□□□ 0.45
MSI1O43347 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MSI1O43347 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.88■□□□□ 0.45
MSI1O43347 AC004790.2-201ENST00000623588 572 ntBASIC17.88■□□□□ 0.45
MSI1O43347 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MSI1O43347 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MSI1O43347 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MSI1O43347 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
MSI1O43347 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
MSI1O43347 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
MSI1O43347 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MSI1O43347 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MSI1O43347 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.88■□□□□ 0.45
MSI1O43347 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MSI1O43347 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
MSI1O43347 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MSI1O43347 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MSI1O43347 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MSI1O43347 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MSI1O43347 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
MSI1O43347 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
MSI1O43347 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.87■□□□□ 0.45
MSI1O43347 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
MSI1O43347 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MSI1O43347 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
MSI1O43347 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MSI1O43347 MIR4751-201ENST00000578027 74 ntBASIC17.87■□□□□ 0.45
MSI1O43347 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
MSI1O43347 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
MSI1O43347 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.87■□□□□ 0.45
MSI1O43347 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
MSI1O43347 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.87■□□□□ 0.45
MSI1O43347 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.87■□□□□ 0.45
MSI1O43347 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MSI1O43347 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MSI1O43347 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MSI1O43347 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MSI1O43347 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
MSI1O43347 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms