Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
NDUFA1O15239 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC11.85□□□□□ -0.51
NDUFA1O15239 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC11.85□□□□□ -0.51
NDUFA1O15239 AC046185.3-201ENST00000623228 1824 ntBASIC11.85□□□□□ -0.51
NDUFA1O15239 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC11.85□□□□□ -0.51
NDUFA1O15239 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
NDUFA1O15239 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC11.85□□□□□ -0.51
NDUFA1O15239 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
NDUFA1O15239 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
NDUFA1O15239 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
NDUFA1O15239 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC11.85□□□□□ -0.51
NDUFA1O15239 AC103702.1-201ENST00000548801 2630 ntBASIC11.85□□□□□ -0.51
NDUFA1O15239 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
NDUFA1O15239 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC11.85□□□□□ -0.51
NDUFA1O15239 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC11.85□□□□□ -0.51
NDUFA1O15239 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NDUFA1O15239 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
NDUFA1O15239 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NDUFA1O15239 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC11.85□□□□□ -0.51
NDUFA1O15239 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
NDUFA1O15239 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
NDUFA1O15239 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NDUFA1O15239 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
NDUFA1O15239 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NDUFA1O15239 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
NDUFA1O15239 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NDUFA1O15239 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC11.84□□□□□ -0.51
NDUFA1O15239 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC11.84□□□□□ -0.51
NDUFA1O15239 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
NDUFA1O15239 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NDUFA1O15239 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
NDUFA1O15239 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC11.84□□□□□ -0.51
NDUFA1O15239 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
NDUFA1O15239 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NDUFA1O15239 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC11.84□□□□□ -0.51
NDUFA1O15239 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NDUFA1O15239 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NDUFA1O15239 MMP23A-201ENST00000234610 1017 ntBASIC11.84□□□□□ -0.51
NDUFA1O15239 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC11.84□□□□□ -0.51
NDUFA1O15239 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
NDUFA1O15239 PVRIG2P-201ENST00000435460 978 ntBASIC11.84□□□□□ -0.51
NDUFA1O15239 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NDUFA1O15239 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC11.84□□□□□ -0.51
NDUFA1O15239 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
NDUFA1O15239 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC11.84□□□□□ -0.51
NDUFA1O15239 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
NDUFA1O15239 MIR4497-201ENST00000583208 89 ntBASIC11.84□□□□□ -0.51
NDUFA1O15239 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NDUFA1O15239 AC007950.2-201ENST00000615045 2347 ntBASIC11.84□□□□□ -0.51
NDUFA1O15239 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NDUFA1O15239 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC11.84□□□□□ -0.51
NDUFA1O15239 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NDUFA1O15239 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NDUFA1O15239 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC11.84□□□□□ -0.51
NDUFA1O15239 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NDUFA1O15239 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
NDUFA1O15239 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NDUFA1O15239 LINC00167-201ENST00000530583 1419 ntBASIC11.84□□□□□ -0.51
NDUFA1O15239 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
NDUFA1O15239 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NDUFA1O15239 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
NDUFA1O15239 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NDUFA1O15239 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
NDUFA1O15239 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
NDUFA1O15239 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NDUFA1O15239 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
NDUFA1O15239 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.51
NDUFA1O15239 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NDUFA1O15239 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NDUFA1O15239 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NDUFA1O15239 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
NDUFA1O15239 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
NDUFA1O15239 AC078925.2-201ENST00000624013 1973 ntBASIC11.83□□□□□ -0.52
NDUFA1O15239 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
NDUFA1O15239 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC11.83□□□□□ -0.52
NDUFA1O15239 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NDUFA1O15239 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
NDUFA1O15239 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NDUFA1O15239 MIR600HG-201ENST00000449175 5984 ntBASIC11.83□□□□□ -0.52
NDUFA1O15239 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NDUFA1O15239 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NDUFA1O15239 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC11.83□□□□□ -0.52
NDUFA1O15239 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
NDUFA1O15239 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
NDUFA1O15239 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC11.83□□□□□ -0.52
NDUFA1O15239 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC11.83□□□□□ -0.52
NDUFA1O15239 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NDUFA1O15239 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NDUFA1O15239 Telomerase-vert.1-201ENST00000363312 438 ntBASIC11.83□□□□□ -0.52
NDUFA1O15239 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
NDUFA1O15239 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC11.83□□□□□ -0.52
NDUFA1O15239 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC11.83□□□□□ -0.52
NDUFA1O15239 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC11.83□□□□□ -0.52
NDUFA1O15239 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC11.83□□□□□ -0.52
NDUFA1O15239 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NDUFA1O15239 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC11.83□□□□□ -0.52
NDUFA1O15239 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
NDUFA1O15239 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC11.83□□□□□ -0.52
NDUFA1O15239 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
NDUFA1O15239 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms