Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.74■□□□□ 0.27
UBFD1O14562 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.74■□□□□ 0.27
UBFD1O14562 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.74■□□□□ 0.27
UBFD1O14562 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UBFD1O14562 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBFD1O14562 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBFD1O14562 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
UBFD1O14562 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.74■□□□□ 0.27
UBFD1O14562 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBFD1O14562 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBFD1O14562 GPR89P-201ENST00000407924 1495 ntBASIC16.73■□□□□ 0.27
UBFD1O14562 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UBFD1O14562 TP73-AS1-210ENST00000637775 1455 ntBASIC16.73■□□□□ 0.27
UBFD1O14562 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBFD1O14562 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.73■□□□□ 0.27
UBFD1O14562 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBFD1O14562 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
UBFD1O14562 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBFD1O14562 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBFD1O14562 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBFD1O14562 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBFD1O14562 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.73■□□□□ 0.27
UBFD1O14562 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBFD1O14562 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.73■□□□□ 0.27
UBFD1O14562 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBFD1O14562 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.73■□□□□ 0.27
UBFD1O14562 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBFD1O14562 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBFD1O14562 AC003669.1-201ENST00000334569 611 ntBASIC16.73■□□□□ 0.27
UBFD1O14562 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBFD1O14562 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.73■□□□□ 0.27
UBFD1O14562 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
UBFD1O14562 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.73■□□□□ 0.27
UBFD1O14562 BX276092.5-203ENST00000456199 560 ntBASIC16.73■□□□□ 0.27
UBFD1O14562 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
UBFD1O14562 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.73■□□□□ 0.27
UBFD1O14562 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.73■□□□□ 0.27
UBFD1O14562 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.73■□□□□ 0.27
UBFD1O14562 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
UBFD1O14562 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.73■□□□□ 0.27
UBFD1O14562 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
UBFD1O14562 AC073592.5-201ENST00000624854 528 ntBASIC16.73■□□□□ 0.27
UBFD1O14562 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBFD1O14562 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.73■□□□□ 0.27
UBFD1O14562 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
UBFD1O14562 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBFD1O14562 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
UBFD1O14562 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
UBFD1O14562 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
UBFD1O14562 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.73■□□□□ 0.27
UBFD1O14562 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.73■□□□□ 0.27
UBFD1O14562 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBFD1O14562 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UBFD1O14562 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.73■□□□□ 0.27
UBFD1O14562 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UBFD1O14562 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.73■□□□□ 0.27
UBFD1O14562 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.73■□□□□ 0.27
UBFD1O14562 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
UBFD1O14562 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.73■□□□□ 0.27
UBFD1O14562 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.72■□□□□ 0.27
UBFD1O14562 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBFD1O14562 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.72■□□□□ 0.27
UBFD1O14562 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBFD1O14562 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
UBFD1O14562 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
UBFD1O14562 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBFD1O14562 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
UBFD1O14562 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBFD1O14562 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
UBFD1O14562 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
UBFD1O14562 AL662844.4-201ENST00000606367 2838 ntBASIC16.72■□□□□ 0.27
UBFD1O14562 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.72■□□□□ 0.27
UBFD1O14562 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBFD1O14562 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBFD1O14562 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBFD1O14562 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.72■□□□□ 0.27
UBFD1O14562 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.72■□□□□ 0.27
UBFD1O14562 FAM86EP-206ENST00000510506 987 ntBASIC16.72■□□□□ 0.27
UBFD1O14562 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.72■□□□□ 0.27
UBFD1O14562 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.72■□□□□ 0.27
UBFD1O14562 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBFD1O14562 AL121956.5-201ENST00000625261 221 ntBASIC16.72■□□□□ 0.27
UBFD1O14562 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
UBFD1O14562 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.72■□□□□ 0.27
UBFD1O14562 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
UBFD1O14562 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
UBFD1O14562 AL645728.1-201ENST00000366221 2101 ntBASIC16.72■□□□□ 0.27
UBFD1O14562 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.72■□□□□ 0.27
UBFD1O14562 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.72■□□□□ 0.27
UBFD1O14562 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBFD1O14562 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UBFD1O14562 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.71■□□□□ 0.27
UBFD1O14562 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBFD1O14562 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.71■□□□□ 0.27
UBFD1O14562 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBFD1O14562 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBFD1O14562 AC006449.5-201ENST00000610658 2098 ntBASIC16.71■□□□□ 0.27
UBFD1O14562 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBFD1O14562 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBFD1O14562 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms