Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
CDC7O00311 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.94■□□□□ 0.3
CDC7O00311 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDC7O00311 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDC7O00311 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDC7O00311 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDC7O00311 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDC7O00311 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.94■□□□□ 0.3
CDC7O00311 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDC7O00311 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CDC7O00311 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.94■□□□□ 0.3
CDC7O00311 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.94■□□□□ 0.3
CDC7O00311 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.94■□□□□ 0.3
CDC7O00311 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.94■□□□□ 0.3
CDC7O00311 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDC7O00311 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDC7O00311 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CDC7O00311 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
CDC7O00311 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.94■□□□□ 0.3
CDC7O00311 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.94■□□□□ 0.3
CDC7O00311 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDC7O00311 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CDC7O00311 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CDC7O00311 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDC7O00311 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.94■□□□□ 0.3
CDC7O00311 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.94■□□□□ 0.3
CDC7O00311 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDC7O00311 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDC7O00311 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.94■□□□□ 0.3
CDC7O00311 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.94■□□□□ 0.3
CDC7O00311 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.93■□□□□ 0.3
CDC7O00311 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.93■□□□□ 0.3
CDC7O00311 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDC7O00311 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDC7O00311 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDC7O00311 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.93■□□□□ 0.3
CDC7O00311 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.93■□□□□ 0.3
CDC7O00311 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CDC7O00311 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDC7O00311 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDC7O00311 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.93■□□□□ 0.3
CDC7O00311 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.93■□□□□ 0.3
CDC7O00311 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.93■□□□□ 0.3
CDC7O00311 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDC7O00311 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CDC7O00311 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDC7O00311 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.93■□□□□ 0.3
CDC7O00311 SPDYE21P-201ENST00000413323 827 ntBASIC16.93■□□□□ 0.3
CDC7O00311 UPK3BP1-201ENST00000428678 509 ntBASIC16.93■□□□□ 0.3
CDC7O00311 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
CDC7O00311 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.93■□□□□ 0.3
CDC7O00311 ABCD1P5-201ENST00000445663 754 ntBASIC16.93■□□□□ 0.3
CDC7O00311 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDC7O00311 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.93■□□□□ 0.3
CDC7O00311 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
CDC7O00311 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.93■□□□□ 0.3
CDC7O00311 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.93■□□□□ 0.3
CDC7O00311 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.93■□□□□ 0.3
CDC7O00311 AL591684.3-201ENST00000605187 298 ntBASIC16.93■□□□□ 0.3
CDC7O00311 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.93■□□□□ 0.3
CDC7O00311 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.93■□□□□ 0.3
CDC7O00311 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDC7O00311 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDC7O00311 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CDC7O00311 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDC7O00311 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CDC7O00311 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CDC7O00311 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.93■□□□□ 0.3
CDC7O00311 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDC7O00311 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
CDC7O00311 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDC7O00311 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
CDC7O00311 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.93■□□□□ 0.3
CDC7O00311 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDC7O00311 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CDC7O00311 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CDC7O00311 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.92■□□□□ 0.3
CDC7O00311 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CDC7O00311 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDC7O00311 FLJ38576-201ENST00000623820 2459 ntBASIC16.92■□□□□ 0.3
CDC7O00311 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.92■□□□□ 0.3
CDC7O00311 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDC7O00311 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CDC7O00311 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDC7O00311 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDC7O00311 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.92■□□□□ 0.3
CDC7O00311 AL020989.1-201ENST00000422979 469 ntBASIC16.92■□□□□ 0.3
CDC7O00311 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.92■□□□□ 0.3
CDC7O00311 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDC7O00311 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDC7O00311 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDC7O00311 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.92■□□□□ 0.3
CDC7O00311 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDC7O00311 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDC7O00311 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDC7O00311 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CDC7O00311 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.92■□□□□ 0.3
CDC7O00311 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
CDC7O00311 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CDC7O00311 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms