Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMX2-CTNND1H3BSU7 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.98■□□□□ 0.31
TMX2-CTNND1H3BSU7 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMX2-CTNND1H3BSU7 RPSAP43-201ENST00000402237 625 ntBASIC16.98■□□□□ 0.31
TMX2-CTNND1H3BSU7 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.98■□□□□ 0.31
TMX2-CTNND1H3BSU7 AC004832.2-201ENST00000426397 482 ntBASIC16.98■□□□□ 0.31
TMX2-CTNND1H3BSU7 GPX1P2-201ENST00000429271 606 ntBASIC16.98■□□□□ 0.31
TMX2-CTNND1H3BSU7 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.98■□□□□ 0.31
TMX2-CTNND1H3BSU7 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
TMX2-CTNND1H3BSU7 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.98■□□□□ 0.31
TMX2-CTNND1H3BSU7 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.98■□□□□ 0.31
TMX2-CTNND1H3BSU7 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.98■□□□□ 0.31
TMX2-CTNND1H3BSU7 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.98■□□□□ 0.31
TMX2-CTNND1H3BSU7 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.98■□□□□ 0.31
TMX2-CTNND1H3BSU7 MTDHP5-201ENST00000598980 586 ntBASIC16.98■□□□□ 0.31
TMX2-CTNND1H3BSU7 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TMX2-CTNND1H3BSU7 AL589182.2-201ENST00000619332 1049 ntBASIC16.98■□□□□ 0.31
TMX2-CTNND1H3BSU7 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.98■□□□□ 0.31
TMX2-CTNND1H3BSU7 AD001527.2-201ENST00000622994 785 ntBASIC16.98■□□□□ 0.31
TMX2-CTNND1H3BSU7 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.98■□□□□ 0.31
TMX2-CTNND1H3BSU7 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMX2-CTNND1H3BSU7 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMX2-CTNND1H3BSU7 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMX2-CTNND1H3BSU7 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMX2-CTNND1H3BSU7 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMX2-CTNND1H3BSU7 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
TMX2-CTNND1H3BSU7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMX2-CTNND1H3BSU7 AP002414.3-201ENST00000589352 1468 ntBASIC16.98■□□□□ 0.31
TMX2-CTNND1H3BSU7 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TMX2-CTNND1H3BSU7 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMX2-CTNND1H3BSU7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.97■□□□□ 0.31
TMX2-CTNND1H3BSU7 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMX2-CTNND1H3BSU7 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMX2-CTNND1H3BSU7 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.97■□□□□ 0.31
TMX2-CTNND1H3BSU7 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.97■□□□□ 0.31
TMX2-CTNND1H3BSU7 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.97■□□□□ 0.31
TMX2-CTNND1H3BSU7 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMX2-CTNND1H3BSU7 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TMX2-CTNND1H3BSU7 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TMX2-CTNND1H3BSU7 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.97■□□□□ 0.31
TMX2-CTNND1H3BSU7 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TMX2-CTNND1H3BSU7 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TMX2-CTNND1H3BSU7 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.97■□□□□ 0.31
TMX2-CTNND1H3BSU7 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TMX2-CTNND1H3BSU7 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMX2-CTNND1H3BSU7 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMX2-CTNND1H3BSU7 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TMX2-CTNND1H3BSU7 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMX2-CTNND1H3BSU7 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.97■□□□□ 0.31
TMX2-CTNND1H3BSU7 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMX2-CTNND1H3BSU7 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.97■□□□□ 0.31
TMX2-CTNND1H3BSU7 YBX2P1-201ENST00000394192 760 ntBASIC16.97■□□□□ 0.31
TMX2-CTNND1H3BSU7 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.97■□□□□ 0.31
TMX2-CTNND1H3BSU7 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.97■□□□□ 0.31
TMX2-CTNND1H3BSU7 BX005266.1-201ENST00000473402 457 ntBASIC16.97■□□□□ 0.31
TMX2-CTNND1H3BSU7 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.97■□□□□ 0.31
TMX2-CTNND1H3BSU7 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.97■□□□□ 0.31
TMX2-CTNND1H3BSU7 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.97■□□□□ 0.31
TMX2-CTNND1H3BSU7 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
TMX2-CTNND1H3BSU7 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.97■□□□□ 0.31
TMX2-CTNND1H3BSU7 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TMX2-CTNND1H3BSU7 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMX2-CTNND1H3BSU7 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TMX2-CTNND1H3BSU7 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.97■□□□□ 0.31
TMX2-CTNND1H3BSU7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TMX2-CTNND1H3BSU7 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.97■□□□□ 0.31
TMX2-CTNND1H3BSU7 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TMX2-CTNND1H3BSU7 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMX2-CTNND1H3BSU7 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TMX2-CTNND1H3BSU7 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMX2-CTNND1H3BSU7 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMX2-CTNND1H3BSU7 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.97■□□□□ 0.31
TMX2-CTNND1H3BSU7 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.97■□□□□ 0.31
TMX2-CTNND1H3BSU7 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TMX2-CTNND1H3BSU7 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMX2-CTNND1H3BSU7 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.96■□□□□ 0.31
TMX2-CTNND1H3BSU7 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.96■□□□□ 0.31
TMX2-CTNND1H3BSU7 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.96■□□□□ 0.31
TMX2-CTNND1H3BSU7 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMX2-CTNND1H3BSU7 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TMX2-CTNND1H3BSU7 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.96■□□□□ 0.31
TMX2-CTNND1H3BSU7 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMX2-CTNND1H3BSU7 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMX2-CTNND1H3BSU7 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMX2-CTNND1H3BSU7 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMX2-CTNND1H3BSU7 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMX2-CTNND1H3BSU7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
TMX2-CTNND1H3BSU7 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMX2-CTNND1H3BSU7 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMX2-CTNND1H3BSU7 COX5BP2-201ENST00000392354 334 ntBASIC16.96■□□□□ 0.31
TMX2-CTNND1H3BSU7 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.96■□□□□ 0.31
TMX2-CTNND1H3BSU7 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TMX2-CTNND1H3BSU7 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.96■□□□□ 0.31
TMX2-CTNND1H3BSU7 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.96■□□□□ 0.31
TMX2-CTNND1H3BSU7 AC009947.1-201ENST00000444350 727 ntBASIC16.96■□□□□ 0.31
TMX2-CTNND1H3BSU7 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TMX2-CTNND1H3BSU7 AC136632.2-201ENST00000512891 861 ntBASIC16.96■□□□□ 0.31
TMX2-CTNND1H3BSU7 DUTP2-201ENST00000519164 463 ntBASIC16.96■□□□□ 0.31
TMX2-CTNND1H3BSU7 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.96■□□□□ 0.31
TMX2-CTNND1H3BSU7 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms