Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.24■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.24■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.24■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 AC129492.6-201ENST00000611383 1305 ntBASIC17.23■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.23■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.23■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 AC004967.1-201ENST00000453589 447 ntBASIC17.23■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.23■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.23■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 AC005829.1-201ENST00000570002 483 ntBASIC17.23■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 AC055717.3-201ENST00000622967 595 ntBASIC17.23■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 C20orf181-201ENST00000623918 480 ntBASIC17.23■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.23■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.23■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.23■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.22■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 FAM185BP-201ENST00000443595 716 ntBASIC17.22■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.22■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.22■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.22■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 AC025580.3-201ENST00000617932 1424 ntBASIC17.21■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 AC134043.2-201ENST00000624206 2238 ntBASIC17.21■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.21■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.21■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.21■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.21■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 AC211486.1-202ENST00000416371 468 ntBASIC17.21■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.21■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.21■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 SLC25A6P2-201ENST00000497974 877 ntBASIC17.21■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 AC211476.1-201ENST00000503899 468 ntBASIC17.21■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.21■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.21■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
C1QTNF3-AMACRE9PGA6 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.21■□□□□ 0.34
C1QTNF3-AMACRE9PGA6 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.2■□□□□ 0.34
C1QTNF3-AMACRE9PGA6 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
C1QTNF3-AMACRE9PGA6 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
C1QTNF3-AMACRE9PGA6 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C1QTNF3-AMACRE9PGA6 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
C1QTNF3-AMACRE9PGA6 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C1QTNF3-AMACRE9PGA6 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
C1QTNF3-AMACRE9PGA6 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms