Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC01546A6NGU7 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
LINC01546A6NGU7 AC068418.2-201ENST00000577309 3703 ntBASIC12.16□□□□□ -0.46
LINC01546A6NGU7 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01546A6NGU7 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01546A6NGU7 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01546A6NGU7 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC12.16□□□□□ -0.46
LINC01546A6NGU7 AC073347.1-201ENST00000421633 2643 ntBASIC12.16□□□□□ -0.46
LINC01546A6NGU7 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01546A6NGU7 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01546A6NGU7 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC12.16□□□□□ -0.46
LINC01546A6NGU7 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
LINC01546A6NGU7 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01546A6NGU7 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC12.16□□□□□ -0.46
LINC01546A6NGU7 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01546A6NGU7 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01546A6NGU7 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01546A6NGU7 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01546A6NGU7 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC12.16□□□□□ -0.46
LINC01546A6NGU7 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01546A6NGU7 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01546A6NGU7 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC12.16□□□□□ -0.46
LINC01546A6NGU7 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01546A6NGU7 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01546A6NGU7 CRYGFP-201ENST00000418459 633 ntBASIC12.16□□□□□ -0.46
LINC01546A6NGU7 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC12.16□□□□□ -0.46
LINC01546A6NGU7 DLX3-202ENST00000512495 834 ntTSL 2 BASIC12.16□□□□□ -0.46
LINC01546A6NGU7 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC12.16□□□□□ -0.46
LINC01546A6NGU7 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC12.16□□□□□ -0.46
LINC01546A6NGU7 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC12.16□□□□□ -0.46
LINC01546A6NGU7 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
LINC01546A6NGU7 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01546A6NGU7 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01546A6NGU7 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC12.16□□□□□ -0.46
LINC01546A6NGU7 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
LINC01546A6NGU7 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01546A6NGU7 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01546A6NGU7 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01546A6NGU7 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC12.16□□□□□ -0.46
LINC01546A6NGU7 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01546A6NGU7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC12.16□□□□□ -0.46
LINC01546A6NGU7 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC12.16□□□□□ -0.46
LINC01546A6NGU7 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01546A6NGU7 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC12.16□□□□□ -0.46
LINC01546A6NGU7 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01546A6NGU7 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC12.16□□□□□ -0.46
LINC01546A6NGU7 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
LINC01546A6NGU7 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
LINC01546A6NGU7 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01546A6NGU7 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01546A6NGU7 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC12.16□□□□□ -0.46
LINC01546A6NGU7 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01546A6NGU7 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01546A6NGU7 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01546A6NGU7 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC12.15□□□□□ -0.46
LINC01546A6NGU7 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC12.15□□□□□ -0.46
LINC01546A6NGU7 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01546A6NGU7 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01546A6NGU7 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
LINC01546A6NGU7 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01546A6NGU7 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC12.15□□□□□ -0.46
LINC01546A6NGU7 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
LINC01546A6NGU7 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01546A6NGU7 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC12.15□□□□□ -0.46
LINC01546A6NGU7 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01546A6NGU7 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01546A6NGU7 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
LINC01546A6NGU7 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
LINC01546A6NGU7 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01546A6NGU7 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01546A6NGU7 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01546A6NGU7 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC12.15□□□□□ -0.46
LINC01546A6NGU7 BX088651.1-201ENST00000540551 451 ntBASIC12.15□□□□□ -0.46
LINC01546A6NGU7 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC12.15□□□□□ -0.46
LINC01546A6NGU7 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC12.15□□□□□ -0.46
LINC01546A6NGU7 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC12.15□□□□□ -0.46
LINC01546A6NGU7 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC12.15□□□□□ -0.46
LINC01546A6NGU7 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
LINC01546A6NGU7 AC024563.2-201ENST00000603282 481 ntBASIC12.15□□□□□ -0.46
LINC01546A6NGU7 GRAMD4P8-201ENST00000605465 1115 ntBASIC12.15□□□□□ -0.46
LINC01546A6NGU7 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC12.15□□□□□ -0.46
LINC01546A6NGU7 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01546A6NGU7 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
LINC01546A6NGU7 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01546A6NGU7 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01546A6NGU7 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
LINC01546A6NGU7 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01546A6NGU7 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC12.15□□□□□ -0.46
LINC01546A6NGU7 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
LINC01546A6NGU7 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC12.15□□□□□ -0.47
LINC01546A6NGU7 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC12.15□□□□□ -0.47
LINC01546A6NGU7 AC079328.2-201ENST00000561241 3354 ntBASIC12.15□□□□□ -0.47
LINC01546A6NGU7 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01546A6NGU7 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms