Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RCCD1A6NED2 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RCCD1A6NED2 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RCCD1A6NED2 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RCCD1A6NED2 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RCCD1A6NED2 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RCCD1A6NED2 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RCCD1A6NED2 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RCCD1A6NED2 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RCCD1A6NED2 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RCCD1A6NED2 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RCCD1A6NED2 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RCCD1A6NED2 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RCCD1A6NED2 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RCCD1A6NED2 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
RCCD1A6NED2 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RCCD1A6NED2 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RCCD1A6NED2 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RCCD1A6NED2 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
RCCD1A6NED2 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RCCD1A6NED2 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RCCD1A6NED2 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RCCD1A6NED2 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RCCD1A6NED2 AK4P3-201ENST00000418260 669 ntBASIC18.33■□□□□ 0.52
RCCD1A6NED2 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RCCD1A6NED2 GUSBP12-201ENST00000513727 720 ntBASIC18.33■□□□□ 0.52
RCCD1A6NED2 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
RCCD1A6NED2 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
RCCD1A6NED2 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.33■□□□□ 0.52
RCCD1A6NED2 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
RCCD1A6NED2 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
RCCD1A6NED2 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RCCD1A6NED2 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RCCD1A6NED2 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.33■□□□□ 0.52
RCCD1A6NED2 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RCCD1A6NED2 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.33■□□□□ 0.52
RCCD1A6NED2 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
RCCD1A6NED2 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.33■□□□□ 0.52
RCCD1A6NED2 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
RCCD1A6NED2 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RCCD1A6NED2 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RCCD1A6NED2 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RCCD1A6NED2 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RCCD1A6NED2 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
RCCD1A6NED2 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RCCD1A6NED2 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RCCD1A6NED2 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RCCD1A6NED2 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.32■□□□□ 0.52
RCCD1A6NED2 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RCCD1A6NED2 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RCCD1A6NED2 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
RCCD1A6NED2 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
RCCD1A6NED2 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.32■□□□□ 0.52
RCCD1A6NED2 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RCCD1A6NED2 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC18.32■□□□□ 0.52
RCCD1A6NED2 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.32■□□□□ 0.52
RCCD1A6NED2 AC111152.3-201ENST00000569699 673 ntBASIC18.32■□□□□ 0.52
RCCD1A6NED2 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RCCD1A6NED2 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.32■□□□□ 0.52
RCCD1A6NED2 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RCCD1A6NED2 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RCCD1A6NED2 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RCCD1A6NED2 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RCCD1A6NED2 AL391256.1-201ENST00000443260 1855 ntBASIC18.32■□□□□ 0.52
RCCD1A6NED2 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
RCCD1A6NED2 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.32■□□□□ 0.52
RCCD1A6NED2 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RCCD1A6NED2 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
RCCD1A6NED2 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.32■□□□□ 0.52
RCCD1A6NED2 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RCCD1A6NED2 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
RCCD1A6NED2 GPR89P-201ENST00000407924 1495 ntBASIC18.32■□□□□ 0.52
RCCD1A6NED2 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RCCD1A6NED2 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RCCD1A6NED2 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RCCD1A6NED2 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RCCD1A6NED2 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.31■□□□□ 0.52
RCCD1A6NED2 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RCCD1A6NED2 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RCCD1A6NED2 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
RCCD1A6NED2 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RCCD1A6NED2 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RCCD1A6NED2 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC18.31■□□□□ 0.52
RCCD1A6NED2 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
RCCD1A6NED2 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.31■□□□□ 0.52
RCCD1A6NED2 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.31■□□□□ 0.52
RCCD1A6NED2 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RCCD1A6NED2 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RCCD1A6NED2 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
RCCD1A6NED2 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RCCD1A6NED2 FAM220CP-201ENST00000395253 831 ntBASIC18.31■□□□□ 0.52
RCCD1A6NED2 TSPY22P-201ENST00000427496 604 ntBASIC18.31■□□□□ 0.52
RCCD1A6NED2 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.31■□□□□ 0.52
RCCD1A6NED2 AC104076.2-201ENST00000448912 469 ntBASIC18.31■□□□□ 0.52
RCCD1A6NED2 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.31■□□□□ 0.52
RCCD1A6NED2 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.31■□□□□ 0.52
RCCD1A6NED2 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.31■□□□□ 0.52
RCCD1A6NED2 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RCCD1A6NED2 AC073912.3-201ENST00000624414 853 ntBASIC18.31■□□□□ 0.52
RCCD1A6NED2 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms