Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV5-4A0A0C4DH59 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV5-4A0A0C4DH59 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV5-4A0A0C4DH59 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV5-4A0A0C4DH59 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV5-4A0A0C4DH59 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV5-4A0A0C4DH59 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV5-4A0A0C4DH59 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV5-4A0A0C4DH59 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV5-4A0A0C4DH59 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV5-4A0A0C4DH59 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV5-4A0A0C4DH59 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV5-4A0A0C4DH59 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV5-4A0A0C4DH59 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV5-4A0A0C4DH59 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.93■□□□□ 0.3
TRBV5-4A0A0C4DH59 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.93■□□□□ 0.3
TRBV5-4A0A0C4DH59 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV5-4A0A0C4DH59 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.93■□□□□ 0.3
TRBV5-4A0A0C4DH59 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.93■□□□□ 0.3
TRBV5-4A0A0C4DH59 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.93■□□□□ 0.3
TRBV5-4A0A0C4DH59 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.93■□□□□ 0.3
TRBV5-4A0A0C4DH59 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.93■□□□□ 0.3
TRBV5-4A0A0C4DH59 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.93■□□□□ 0.3
TRBV5-4A0A0C4DH59 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TRBV5-4A0A0C4DH59 AC008667.4-201ENST00000607370 168 ntBASIC16.93■□□□□ 0.3
TRBV5-4A0A0C4DH59 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.93■□□□□ 0.3
TRBV5-4A0A0C4DH59 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.93■□□□□ 0.3
TRBV5-4A0A0C4DH59 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.93■□□□□ 0.3
TRBV5-4A0A0C4DH59 PGM5P2-202ENST00000637225 1043 ntBASIC16.93■□□□□ 0.3
TRBV5-4A0A0C4DH59 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
TRBV5-4A0A0C4DH59 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV5-4A0A0C4DH59 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV5-4A0A0C4DH59 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV5-4A0A0C4DH59 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV5-4A0A0C4DH59 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV5-4A0A0C4DH59 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.93■□□□□ 0.3
TRBV5-4A0A0C4DH59 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.93■□□□□ 0.3
TRBV5-4A0A0C4DH59 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV5-4A0A0C4DH59 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.93■□□□□ 0.3
TRBV5-4A0A0C4DH59 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV5-4A0A0C4DH59 HLA-A-201ENST00000376802 1334 ntBASIC16.93■□□□□ 0.3
TRBV5-4A0A0C4DH59 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.93■□□□□ 0.3
TRBV5-4A0A0C4DH59 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV5-4A0A0C4DH59 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TRBV5-4A0A0C4DH59 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TRBV5-4A0A0C4DH59 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV5-4A0A0C4DH59 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV5-4A0A0C4DH59 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV5-4A0A0C4DH59 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV5-4A0A0C4DH59 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.92■□□□□ 0.3
TRBV5-4A0A0C4DH59 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TRBV5-4A0A0C4DH59 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.92■□□□□ 0.3
TRBV5-4A0A0C4DH59 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.92■□□□□ 0.3
TRBV5-4A0A0C4DH59 IGHV3-65-201ENST00000523210 341 ntBASIC16.92■□□□□ 0.3
TRBV5-4A0A0C4DH59 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.92■□□□□ 0.3
TRBV5-4A0A0C4DH59 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV5-4A0A0C4DH59 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.92■□□□□ 0.3
TRBV5-4A0A0C4DH59 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.92■□□□□ 0.3
TRBV5-4A0A0C4DH59 AP001005.1-201ENST00000571755 1248 ntBASIC16.92■□□□□ 0.3
TRBV5-4A0A0C4DH59 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.92■□□□□ 0.3
TRBV5-4A0A0C4DH59 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
TRBV5-4A0A0C4DH59 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV5-4A0A0C4DH59 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV5-4A0A0C4DH59 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.92■□□□□ 0.3
TRBV5-4A0A0C4DH59 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV5-4A0A0C4DH59 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV5-4A0A0C4DH59 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV5-4A0A0C4DH59 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.92■□□□□ 0.3
TRBV5-4A0A0C4DH59 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.92■□□□□ 0.3
TRBV5-4A0A0C4DH59 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV5-4A0A0C4DH59 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TRBV5-4A0A0C4DH59 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV5-4A0A0C4DH59 AC106820.2-201ENST00000563775 3264 ntBASIC16.92■□□□□ 0.3
TRBV5-4A0A0C4DH59 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV5-4A0A0C4DH59 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV5-4A0A0C4DH59 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.91■□□□□ 0.3
TRBV5-4A0A0C4DH59 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.91■□□□□ 0.3
TRBV5-4A0A0C4DH59 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV5-4A0A0C4DH59 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV5-4A0A0C4DH59 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV5-4A0A0C4DH59 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV5-4A0A0C4DH59 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV5-4A0A0C4DH59 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TRBV5-4A0A0C4DH59 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.91■□□□□ 0.3
TRBV5-4A0A0C4DH59 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TRBV5-4A0A0C4DH59 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.91■□□□□ 0.3
TRBV5-4A0A0C4DH59 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
TRBV5-4A0A0C4DH59 FDX1P1-201ENST00000449115 551 ntBASIC16.91■□□□□ 0.3
TRBV5-4A0A0C4DH59 AC087163.2-201ENST00000457299 853 ntBASIC16.91■□□□□ 0.3
TRBV5-4A0A0C4DH59 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV5-4A0A0C4DH59 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.91■□□□□ 0.3
TRBV5-4A0A0C4DH59 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.91■□□□□ 0.3
TRBV5-4A0A0C4DH59 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.91■□□□□ 0.3
TRBV5-4A0A0C4DH59 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.91■□□□□ 0.3
TRBV5-4A0A0C4DH59 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV5-4A0A0C4DH59 MIR1199-201ENST00000621445 119 ntBASIC16.91■□□□□ 0.3
TRBV5-4A0A0C4DH59 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.91■□□□□ 0.3
TRBV5-4A0A0C4DH59 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV5-4A0A0C4DH59 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV5-4A0A0C4DH59 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms