Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1G3Q9Y6M4 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1G3Q9Y6M4 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.88■□□□□ 0.29
CSNK1G3Q9Y6M4 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CSNK1G3Q9Y6M4 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CSNK1G3Q9Y6M4 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.88■□□□□ 0.29
CSNK1G3Q9Y6M4 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.88■□□□□ 0.29
CSNK1G3Q9Y6M4 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CSNK1G3Q9Y6M4 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CSNK1G3Q9Y6M4 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CSNK1G3Q9Y6M4 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CSNK1G3Q9Y6M4 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CSNK1G3Q9Y6M4 AC074386.1-202ENST00000463561 864 ntBASIC16.88■□□□□ 0.29
CSNK1G3Q9Y6M4 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
CSNK1G3Q9Y6M4 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CSNK1G3Q9Y6M4 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.88■□□□□ 0.29
CSNK1G3Q9Y6M4 AC027796.2-201ENST00000575326 344 ntBASIC16.88■□□□□ 0.29
CSNK1G3Q9Y6M4 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.88■□□□□ 0.29
CSNK1G3Q9Y6M4 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CSNK1G3Q9Y6M4 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CSNK1G3Q9Y6M4 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
CSNK1G3Q9Y6M4 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CSNK1G3Q9Y6M4 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CSNK1G3Q9Y6M4 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.88■□□□□ 0.29
CSNK1G3Q9Y6M4 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CSNK1G3Q9Y6M4 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CSNK1G3Q9Y6M4 KRT18P28-201ENST00000453838 1332 ntBASIC16.88■□□□□ 0.29
CSNK1G3Q9Y6M4 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.88■□□□□ 0.29
CSNK1G3Q9Y6M4 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CSNK1G3Q9Y6M4 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CSNK1G3Q9Y6M4 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CSNK1G3Q9Y6M4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1G3Q9Y6M4 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1G3Q9Y6M4 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.87■□□□□ 0.29
CSNK1G3Q9Y6M4 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CSNK1G3Q9Y6M4 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.87■□□□□ 0.29
CSNK1G3Q9Y6M4 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.87■□□□□ 0.29
CSNK1G3Q9Y6M4 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1G3Q9Y6M4 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.87■□□□□ 0.29
CSNK1G3Q9Y6M4 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CSNK1G3Q9Y6M4 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1G3Q9Y6M4 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1G3Q9Y6M4 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1G3Q9Y6M4 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.87■□□□□ 0.29
CSNK1G3Q9Y6M4 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1G3Q9Y6M4 CXCL1P1-201ENST00000502804 216 ntBASIC16.87■□□□□ 0.29
CSNK1G3Q9Y6M4 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.87■□□□□ 0.29
CSNK1G3Q9Y6M4 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.87■□□□□ 0.29
CSNK1G3Q9Y6M4 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1G3Q9Y6M4 LINC01451-201ENST00000623792 534 ntBASIC16.87■□□□□ 0.29
CSNK1G3Q9Y6M4 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.87■□□□□ 0.29
CSNK1G3Q9Y6M4 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1G3Q9Y6M4 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1G3Q9Y6M4 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1G3Q9Y6M4 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1G3Q9Y6M4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1G3Q9Y6M4 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1G3Q9Y6M4 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1G3Q9Y6M4 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1G3Q9Y6M4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1G3Q9Y6M4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
CSNK1G3Q9Y6M4 AC046185.3-201ENST00000623228 1824 ntBASIC16.86■□□□□ 0.29
CSNK1G3Q9Y6M4 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.86■□□□□ 0.29
CSNK1G3Q9Y6M4 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1G3Q9Y6M4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1G3Q9Y6M4 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1G3Q9Y6M4 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CSNK1G3Q9Y6M4 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1G3Q9Y6M4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.86■□□□□ 0.29
CSNK1G3Q9Y6M4 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1G3Q9Y6M4 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1G3Q9Y6M4 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CSNK1G3Q9Y6M4 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.86■□□□□ 0.29
CSNK1G3Q9Y6M4 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1G3Q9Y6M4 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1G3Q9Y6M4 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1G3Q9Y6M4 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.86■□□□□ 0.29
CSNK1G3Q9Y6M4 CEND1P1-201ENST00000451006 455 ntBASIC16.86■□□□□ 0.29
CSNK1G3Q9Y6M4 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.86■□□□□ 0.29
CSNK1G3Q9Y6M4 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.86■□□□□ 0.29
CSNK1G3Q9Y6M4 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CSNK1G3Q9Y6M4 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CSNK1G3Q9Y6M4 AL355385.1-201ENST00000606123 409 ntBASIC16.86■□□□□ 0.29
CSNK1G3Q9Y6M4 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.86■□□□□ 0.29
CSNK1G3Q9Y6M4 AL078644.1-201ENST00000609881 752 ntBASIC16.86■□□□□ 0.29
CSNK1G3Q9Y6M4 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.86■□□□□ 0.29
CSNK1G3Q9Y6M4 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.86■□□□□ 0.29
CSNK1G3Q9Y6M4 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1G3Q9Y6M4 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CSNK1G3Q9Y6M4 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1G3Q9Y6M4 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1G3Q9Y6M4 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CSNK1G3Q9Y6M4 AC138028.4-201ENST00000564984 1845 ntBASIC16.86■□□□□ 0.29
CSNK1G3Q9Y6M4 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.86■□□□□ 0.29
CSNK1G3Q9Y6M4 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
CSNK1G3Q9Y6M4 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1G3Q9Y6M4 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CSNK1G3Q9Y6M4 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1G3Q9Y6M4 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CSNK1G3Q9Y6M4 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms