Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
PCDHB7Q9Y5E2 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB7Q9Y5E2 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB7Q9Y5E2 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB7Q9Y5E2 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB7Q9Y5E2 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB7Q9Y5E2 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB7Q9Y5E2 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB7Q9Y5E2 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.49■□□□□ 0.55
PCDHB7Q9Y5E2 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB7Q9Y5E2 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB7Q9Y5E2 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDHB7Q9Y5E2 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB7Q9Y5E2 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB7Q9Y5E2 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
PCDHB7Q9Y5E2 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB7Q9Y5E2 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB7Q9Y5E2 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB7Q9Y5E2 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
PCDHB7Q9Y5E2 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
PCDHB7Q9Y5E2 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB7Q9Y5E2 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB7Q9Y5E2 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
PCDHB7Q9Y5E2 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.48■□□□□ 0.55
PCDHB7Q9Y5E2 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.48■□□□□ 0.55
PCDHB7Q9Y5E2 AL627223.1-201ENST00000416693 442 ntBASIC18.48■□□□□ 0.55
PCDHB7Q9Y5E2 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PCDHB7Q9Y5E2 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDHB7Q9Y5E2 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.48■□□□□ 0.55
PCDHB7Q9Y5E2 FAM86GP-201ENST00000448322 971 ntBASIC18.48■□□□□ 0.55
PCDHB7Q9Y5E2 KRT8P48-201ENST00000515599 1220 ntBASIC18.48■□□□□ 0.55
PCDHB7Q9Y5E2 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDHB7Q9Y5E2 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.48■□□□□ 0.55
PCDHB7Q9Y5E2 SPCS2P1-201ENST00000561636 679 ntBASIC18.48■□□□□ 0.55
PCDHB7Q9Y5E2 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.48■□□□□ 0.55
PCDHB7Q9Y5E2 AC099522.2-201ENST00000607001 744 ntBASIC18.48■□□□□ 0.55
PCDHB7Q9Y5E2 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.48■□□□□ 0.55
PCDHB7Q9Y5E2 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.48■□□□□ 0.55
PCDHB7Q9Y5E2 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.48■□□□□ 0.55
PCDHB7Q9Y5E2 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB7Q9Y5E2 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.48■□□□□ 0.55
PCDHB7Q9Y5E2 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDHB7Q9Y5E2 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB7Q9Y5E2 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB7Q9Y5E2 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
PCDHB7Q9Y5E2 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB7Q9Y5E2 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB7Q9Y5E2 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.48■□□□□ 0.55
PCDHB7Q9Y5E2 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB7Q9Y5E2 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
PCDHB7Q9Y5E2 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHB7Q9Y5E2 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB7Q9Y5E2 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHB7Q9Y5E2 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDHB7Q9Y5E2 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PCDHB7Q9Y5E2 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
PCDHB7Q9Y5E2 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB7Q9Y5E2 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB7Q9Y5E2 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB7Q9Y5E2 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB7Q9Y5E2 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHB7Q9Y5E2 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHB7Q9Y5E2 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB7Q9Y5E2 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB7Q9Y5E2 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB7Q9Y5E2 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
PCDHB7Q9Y5E2 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB7Q9Y5E2 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.47■□□□□ 0.55
PCDHB7Q9Y5E2 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHB7Q9Y5E2 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.47■□□□□ 0.55
PCDHB7Q9Y5E2 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHB7Q9Y5E2 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.47■□□□□ 0.55
PCDHB7Q9Y5E2 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB7Q9Y5E2 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB7Q9Y5E2 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB7Q9Y5E2 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDHB7Q9Y5E2 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
PCDHB7Q9Y5E2 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
PCDHB7Q9Y5E2 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB7Q9Y5E2 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB7Q9Y5E2 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB7Q9Y5E2 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB7Q9Y5E2 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PCDHB7Q9Y5E2 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.47■□□□□ 0.55
PCDHB7Q9Y5E2 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB7Q9Y5E2 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB7Q9Y5E2 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB7Q9Y5E2 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB7Q9Y5E2 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
PCDHB7Q9Y5E2 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.46■□□□□ 0.55
PCDHB7Q9Y5E2 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB7Q9Y5E2 BICD1-207ENST00000551848 1962 ntBASIC18.46■□□□□ 0.55
PCDHB7Q9Y5E2 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
PCDHB7Q9Y5E2 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB7Q9Y5E2 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
PCDHB7Q9Y5E2 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB7Q9Y5E2 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHB7Q9Y5E2 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.46■□□□□ 0.55
PCDHB7Q9Y5E2 TFAMP1-201ENST00000412727 736 ntBASIC18.46■□□□□ 0.55
PCDHB7Q9Y5E2 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms