Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH1Q9Y2L9 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH1Q9Y2L9 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH1Q9Y2L9 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
LRCH1Q9Y2L9 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH1Q9Y2L9 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.46■□□□□ 0.23
LRCH1Q9Y2L9 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.46■□□□□ 0.23
LRCH1Q9Y2L9 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH1Q9Y2L9 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH1Q9Y2L9 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH1Q9Y2L9 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
LRCH1Q9Y2L9 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.46■□□□□ 0.23
LRCH1Q9Y2L9 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
LRCH1Q9Y2L9 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH1Q9Y2L9 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.46■□□□□ 0.23
LRCH1Q9Y2L9 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
LRCH1Q9Y2L9 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH1Q9Y2L9 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH1Q9Y2L9 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH1Q9Y2L9 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH1Q9Y2L9 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH1Q9Y2L9 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.46■□□□□ 0.23
LRCH1Q9Y2L9 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH1Q9Y2L9 TNRC18P2-201ENST00000417666 2714 ntBASIC16.46■□□□□ 0.23
LRCH1Q9Y2L9 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH1Q9Y2L9 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.46■□□□□ 0.23
LRCH1Q9Y2L9 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH1Q9Y2L9 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH1Q9Y2L9 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
LRCH1Q9Y2L9 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.46■□□□□ 0.23
LRCH1Q9Y2L9 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
LRCH1Q9Y2L9 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.46■□□□□ 0.23
LRCH1Q9Y2L9 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH1Q9Y2L9 RARRES2P10-201ENST00000564312 460 ntBASIC16.46■□□□□ 0.23
LRCH1Q9Y2L9 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.46■□□□□ 0.23
LRCH1Q9Y2L9 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH1Q9Y2L9 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH1Q9Y2L9 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH1Q9Y2L9 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.46■□□□□ 0.23
LRCH1Q9Y2L9 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH1Q9Y2L9 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH1Q9Y2L9 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.46■□□□□ 0.23
LRCH1Q9Y2L9 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
LRCH1Q9Y2L9 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH1Q9Y2L9 MTHFR-217ENST00000641820 1569 ntBASIC16.46■□□□□ 0.23
LRCH1Q9Y2L9 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH1Q9Y2L9 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
LRCH1Q9Y2L9 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
LRCH1Q9Y2L9 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH1Q9Y2L9 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH1Q9Y2L9 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH1Q9Y2L9 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH1Q9Y2L9 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH1Q9Y2L9 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.45■□□□□ 0.22
LRCH1Q9Y2L9 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH1Q9Y2L9 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.45■□□□□ 0.22
LRCH1Q9Y2L9 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH1Q9Y2L9 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH1Q9Y2L9 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
LRCH1Q9Y2L9 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
LRCH1Q9Y2L9 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH1Q9Y2L9 KRT16P5-201ENST00000455284 522 ntBASIC16.45■□□□□ 0.22
LRCH1Q9Y2L9 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.45■□□□□ 0.22
LRCH1Q9Y2L9 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.45■□□□□ 0.22
LRCH1Q9Y2L9 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH1Q9Y2L9 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH1Q9Y2L9 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH1Q9Y2L9 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.45■□□□□ 0.22
LRCH1Q9Y2L9 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH1Q9Y2L9 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH1Q9Y2L9 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH1Q9Y2L9 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
LRCH1Q9Y2L9 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
LRCH1Q9Y2L9 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH1Q9Y2L9 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH1Q9Y2L9 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.45■□□□□ 0.22
LRCH1Q9Y2L9 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
LRCH1Q9Y2L9 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
LRCH1Q9Y2L9 AC092053.1-201ENST00000605787 1936 ntBASIC16.45■□□□□ 0.22
LRCH1Q9Y2L9 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.45■□□□□ 0.22
LRCH1Q9Y2L9 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH1Q9Y2L9 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH1Q9Y2L9 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH1Q9Y2L9 AC022898.2-201ENST00000616822 1312 ntBASIC16.45■□□□□ 0.22
LRCH1Q9Y2L9 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH1Q9Y2L9 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH1Q9Y2L9 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH1Q9Y2L9 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH1Q9Y2L9 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH1Q9Y2L9 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH1Q9Y2L9 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH1Q9Y2L9 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH1Q9Y2L9 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH1Q9Y2L9 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH1Q9Y2L9 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.44■□□□□ 0.22
LRCH1Q9Y2L9 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH1Q9Y2L9 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH1Q9Y2L9 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.44■□□□□ 0.22
LRCH1Q9Y2L9 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.44■□□□□ 0.22
LRCH1Q9Y2L9 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms