Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ERGIC3Q9Y282 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
ERGIC3Q9Y282 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
ERGIC3Q9Y282 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ERGIC3Q9Y282 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
ERGIC3Q9Y282 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ERGIC3Q9Y282 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
ERGIC3Q9Y282 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC15.81■□□□□ 0.12
ERGIC3Q9Y282 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC15.81■□□□□ 0.12
ERGIC3Q9Y282 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
ERGIC3Q9Y282 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC15.81■□□□□ 0.12
ERGIC3Q9Y282 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC15.81■□□□□ 0.12
ERGIC3Q9Y282 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.81■□□□□ 0.12
ERGIC3Q9Y282 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ERGIC3Q9Y282 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ERGIC3Q9Y282 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.81■□□□□ 0.12
ERGIC3Q9Y282 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
ERGIC3Q9Y282 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.81■□□□□ 0.12
ERGIC3Q9Y282 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ERGIC3Q9Y282 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ERGIC3Q9Y282 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC15.81■□□□□ 0.12
ERGIC3Q9Y282 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ERGIC3Q9Y282 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.81■□□□□ 0.12
ERGIC3Q9Y282 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ERGIC3Q9Y282 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
ERGIC3Q9Y282 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.81■□□□□ 0.12
ERGIC3Q9Y282 AC010240.3-201ENST00000607688 395 ntBASIC15.81■□□□□ 0.12
ERGIC3Q9Y282 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
ERGIC3Q9Y282 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
ERGIC3Q9Y282 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
ERGIC3Q9Y282 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ERGIC3Q9Y282 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
ERGIC3Q9Y282 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
ERGIC3Q9Y282 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERGIC3Q9Y282 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
ERGIC3Q9Y282 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ERGIC3Q9Y282 AC068587.6-202ENST00000641839 5619 ntBASIC15.8■□□□□ 0.12
ERGIC3Q9Y282 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
ERGIC3Q9Y282 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERGIC3Q9Y282 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERGIC3Q9Y282 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ERGIC3Q9Y282 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ERGIC3Q9Y282 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERGIC3Q9Y282 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.8■□□□□ 0.12
ERGIC3Q9Y282 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC15.8■□□□□ 0.12
ERGIC3Q9Y282 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ERGIC3Q9Y282 AL355355.2-201ENST00000442321 338 ntBASIC15.8■□□□□ 0.12
ERGIC3Q9Y282 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ERGIC3Q9Y282 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC15.8■□□□□ 0.12
ERGIC3Q9Y282 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC15.8■□□□□ 0.12
ERGIC3Q9Y282 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC15.8■□□□□ 0.12
ERGIC3Q9Y282 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC15.8■□□□□ 0.12
ERGIC3Q9Y282 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC15.8■□□□□ 0.12
ERGIC3Q9Y282 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.8■□□□□ 0.12
ERGIC3Q9Y282 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC15.8■□□□□ 0.12
ERGIC3Q9Y282 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ERGIC3Q9Y282 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
ERGIC3Q9Y282 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERGIC3Q9Y282 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERGIC3Q9Y282 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
ERGIC3Q9Y282 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.8■□□□□ 0.12
ERGIC3Q9Y282 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
ERGIC3Q9Y282 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
ERGIC3Q9Y282 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ERGIC3Q9Y282 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
ERGIC3Q9Y282 FLJ16779-201ENST00000612722 7638 ntBASIC15.8■□□□□ 0.12
ERGIC3Q9Y282 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERGIC3Q9Y282 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
ERGIC3Q9Y282 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERGIC3Q9Y282 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERGIC3Q9Y282 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERGIC3Q9Y282 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ERGIC3Q9Y282 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ERGIC3Q9Y282 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ERGIC3Q9Y282 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC15.79■□□□□ 0.12
ERGIC3Q9Y282 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ERGIC3Q9Y282 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ERGIC3Q9Y282 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
ERGIC3Q9Y282 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ERGIC3Q9Y282 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.79■□□□□ 0.12
ERGIC3Q9Y282 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ERGIC3Q9Y282 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ERGIC3Q9Y282 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
ERGIC3Q9Y282 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
ERGIC3Q9Y282 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC15.79■□□□□ 0.12
ERGIC3Q9Y282 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ERGIC3Q9Y282 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC15.79■□□□□ 0.12
ERGIC3Q9Y282 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ERGIC3Q9Y282 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ERGIC3Q9Y282 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
ERGIC3Q9Y282 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ERGIC3Q9Y282 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ERGIC3Q9Y282 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ERGIC3Q9Y282 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.79■□□□□ 0.12
ERGIC3Q9Y282 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ERGIC3Q9Y282 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ERGIC3Q9Y282 FDX2-206ENST00000492239 773 ntTSL 2 BASIC15.79■□□□□ 0.12
ERGIC3Q9Y282 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC15.79■□□□□ 0.12
ERGIC3Q9Y282 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.79■□□□□ 0.12
ERGIC3Q9Y282 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms