Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
SHANK2Q9UPX8 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
SHANK2Q9UPX8 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
SHANK2Q9UPX8 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC25.36■■□□□ 1.65
SHANK2Q9UPX8 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC25.36■■□□□ 1.65
SHANK2Q9UPX8 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC25.36■■□□□ 1.65
SHANK2Q9UPX8 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SHANK2Q9UPX8 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SHANK2Q9UPX8 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC25.35■■□□□ 1.65
SHANK2Q9UPX8 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
SHANK2Q9UPX8 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC25.35■■□□□ 1.65
SHANK2Q9UPX8 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC25.35■■□□□ 1.65
SHANK2Q9UPX8 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC25.35■■□□□ 1.65
SHANK2Q9UPX8 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SHANK2Q9UPX8 POLD4-211ENST00000539074 714 ntTSL 3 BASIC25.35■■□□□ 1.65
SHANK2Q9UPX8 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC25.35■■□□□ 1.65
SHANK2Q9UPX8 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC25.35■■□□□ 1.65
SHANK2Q9UPX8 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC25.35■■□□□ 1.65
SHANK2Q9UPX8 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SHANK2Q9UPX8 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC25.35■■□□□ 1.65
SHANK2Q9UPX8 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SHANK2Q9UPX8 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SHANK2Q9UPX8 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC25.35■■□□□ 1.65
SHANK2Q9UPX8 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC25.35■■□□□ 1.65
SHANK2Q9UPX8 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SHANK2Q9UPX8 AC131009.4-201ENST00000624048 1740 ntBASIC25.35■■□□□ 1.65
SHANK2Q9UPX8 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC25.35■■□□□ 1.65
SHANK2Q9UPX8 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SHANK2Q9UPX8 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SHANK2Q9UPX8 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC25.35■■□□□ 1.65
SHANK2Q9UPX8 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC25.35■■□□□ 1.65
SHANK2Q9UPX8 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC25.34■■□□□ 1.65
SHANK2Q9UPX8 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC25.34■■□□□ 1.65
SHANK2Q9UPX8 HLA-DRB6-201ENST00000411500 1235 ntBASIC25.34■■□□□ 1.65
SHANK2Q9UPX8 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC25.34■■□□□ 1.65
SHANK2Q9UPX8 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC25.34■■□□□ 1.65
SHANK2Q9UPX8 AC008267.7-201ENST00000624570 1194 ntBASIC25.34■■□□□ 1.65
SHANK2Q9UPX8 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SHANK2Q9UPX8 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
SHANK2Q9UPX8 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SHANK2Q9UPX8 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC25.34■■□□□ 1.65
SHANK2Q9UPX8 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SHANK2Q9UPX8 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SHANK2Q9UPX8 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SHANK2Q9UPX8 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
SHANK2Q9UPX8 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC25.34■■□□□ 1.65
SHANK2Q9UPX8 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC25.34■■□□□ 1.65
SHANK2Q9UPX8 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SHANK2Q9UPX8 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC25.34■■□□□ 1.65
SHANK2Q9UPX8 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC25.34■■□□□ 1.65
SHANK2Q9UPX8 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SHANK2Q9UPX8 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
SHANK2Q9UPX8 BOC-212ENST00000485230 2173 ntTSL 2 BASIC25.34■■□□□ 1.65
SHANK2Q9UPX8 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
SHANK2Q9UPX8 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SHANK2Q9UPX8 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
SHANK2Q9UPX8 AC142381.1-201ENST00000426099 345 ntBASIC25.34■■□□□ 1.65
SHANK2Q9UPX8 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC25.34■■□□□ 1.65
SHANK2Q9UPX8 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC25.34■■□□□ 1.65
SHANK2Q9UPX8 AC125807.1-201ENST00000483097 614 ntBASIC25.34■■□□□ 1.65
SHANK2Q9UPX8 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
SHANK2Q9UPX8 AC124947.2-201ENST00000547118 1133 ntBASIC25.34■■□□□ 1.65
SHANK2Q9UPX8 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC25.34■■□□□ 1.65
SHANK2Q9UPX8 MPDU1-223ENST00000582151 728 ntBASIC25.34■■□□□ 1.65
SHANK2Q9UPX8 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC25.34■■□□□ 1.65
SHANK2Q9UPX8 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC25.34■■□□□ 1.65
SHANK2Q9UPX8 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SHANK2Q9UPX8 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
SHANK2Q9UPX8 AL390961.4-201ENST00000623958 2535 ntBASIC25.33■■□□□ 1.65
SHANK2Q9UPX8 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
SHANK2Q9UPX8 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC25.33■■□□□ 1.65
SHANK2Q9UPX8 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC25.33■■□□□ 1.65
SHANK2Q9UPX8 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC25.33■■□□□ 1.65
SHANK2Q9UPX8 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SHANK2Q9UPX8 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
SHANK2Q9UPX8 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC25.33■■□□□ 1.65
SHANK2Q9UPX8 AC026150.2-201ENST00000564693 1156 ntBASIC25.33■■□□□ 1.65
SHANK2Q9UPX8 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.65
SHANK2Q9UPX8 CYP2A7P1-201ENST00000595391 815 ntBASIC25.33■■□□□ 1.65
SHANK2Q9UPX8 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SHANK2Q9UPX8 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.64
SHANK2Q9UPX8 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
SHANK2Q9UPX8 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC25.32■■□□□ 1.64
SHANK2Q9UPX8 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
SHANK2Q9UPX8 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC25.32■■□□□ 1.64
SHANK2Q9UPX8 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
SHANK2Q9UPX8 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SHANK2Q9UPX8 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
SHANK2Q9UPX8 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
SHANK2Q9UPX8 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
SHANK2Q9UPX8 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
SHANK2Q9UPX8 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
SHANK2Q9UPX8 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SHANK2Q9UPX8 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC25.32■■□□□ 1.64
SHANK2Q9UPX8 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC25.32■■□□□ 1.64
SHANK2Q9UPX8 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC25.32■■□□□ 1.64
SHANK2Q9UPX8 YTHDF3-AS1-201ENST00000603538 718 ntBASIC25.32■■□□□ 1.64
SHANK2Q9UPX8 CD276-201ENST00000318424 2738 ntTSL 5 BASIC25.32■■□□□ 1.64
SHANK2Q9UPX8 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
SHANK2Q9UPX8 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC25.32■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms