Protein–RNA interactions for Protein: Q9UPU3

SORCS3, VPS10 domain-containing receptor SorCS3, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SORCS3Q9UPU3 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SORCS3Q9UPU3 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SORCS3Q9UPU3 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SORCS3Q9UPU3 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SORCS3Q9UPU3 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SORCS3Q9UPU3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
SORCS3Q9UPU3 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SORCS3Q9UPU3 FAM58CP-201ENST00000435741 640 ntBASIC18.2■□□□□ 0.5
SORCS3Q9UPU3 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.2■□□□□ 0.5
SORCS3Q9UPU3 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.2■□□□□ 0.5
SORCS3Q9UPU3 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.2■□□□□ 0.5
SORCS3Q9UPU3 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.2■□□□□ 0.5
SORCS3Q9UPU3 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.2■□□□□ 0.5
SORCS3Q9UPU3 AC138761.1-201ENST00000584393 385 ntBASIC18.2■□□□□ 0.5
SORCS3Q9UPU3 AC010654.1-201ENST00000615722 808 ntBASIC18.2■□□□□ 0.5
SORCS3Q9UPU3 AC004877.2-201ENST00000623941 599 ntBASIC18.2■□□□□ 0.5
SORCS3Q9UPU3 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
SORCS3Q9UPU3 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SORCS3Q9UPU3 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SORCS3Q9UPU3 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SORCS3Q9UPU3 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SORCS3Q9UPU3 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.2■□□□□ 0.5
SORCS3Q9UPU3 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.2■□□□□ 0.5
SORCS3Q9UPU3 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SORCS3Q9UPU3 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
SORCS3Q9UPU3 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SORCS3Q9UPU3 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.19■□□□□ 0.5
SORCS3Q9UPU3 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.19■□□□□ 0.5
SORCS3Q9UPU3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.19■□□□□ 0.5
SORCS3Q9UPU3 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
SORCS3Q9UPU3 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
SORCS3Q9UPU3 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SORCS3Q9UPU3 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.19■□□□□ 0.5
SORCS3Q9UPU3 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SORCS3Q9UPU3 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SORCS3Q9UPU3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
SORCS3Q9UPU3 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.19■□□□□ 0.5
SORCS3Q9UPU3 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SORCS3Q9UPU3 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
SORCS3Q9UPU3 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.19■□□□□ 0.5
SORCS3Q9UPU3 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SORCS3Q9UPU3 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
SORCS3Q9UPU3 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SORCS3Q9UPU3 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.19■□□□□ 0.5
SORCS3Q9UPU3 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SORCS3Q9UPU3 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SORCS3Q9UPU3 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SORCS3Q9UPU3 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SORCS3Q9UPU3 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.19■□□□□ 0.5
SORCS3Q9UPU3 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.19■□□□□ 0.5
SORCS3Q9UPU3 IGLL3P-201ENST00000412472 434 ntBASIC18.19■□□□□ 0.5
SORCS3Q9UPU3 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.19■□□□□ 0.5
SORCS3Q9UPU3 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SORCS3Q9UPU3 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SORCS3Q9UPU3 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.19■□□□□ 0.5
SORCS3Q9UPU3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SORCS3Q9UPU3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.19■□□□□ 0.5
SORCS3Q9UPU3 AC010460.3-201ENST00000511359 1579 ntBASIC18.19■□□□□ 0.5
SORCS3Q9UPU3 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.19■□□□□ 0.5
SORCS3Q9UPU3 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SORCS3Q9UPU3 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SORCS3Q9UPU3 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
SORCS3Q9UPU3 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SORCS3Q9UPU3 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SORCS3Q9UPU3 BCAR1-209ENST00000546196 1340 ntBASIC18.19■□□□□ 0.5
SORCS3Q9UPU3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.19■□□□□ 0.5
SORCS3Q9UPU3 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SORCS3Q9UPU3 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SORCS3Q9UPU3 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
SORCS3Q9UPU3 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SORCS3Q9UPU3 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.18■□□□□ 0.5
SORCS3Q9UPU3 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SORCS3Q9UPU3 AC009053.2-201ENST00000563701 2365 ntBASIC18.18■□□□□ 0.5
SORCS3Q9UPU3 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SORCS3Q9UPU3 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SORCS3Q9UPU3 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SORCS3Q9UPU3 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
SORCS3Q9UPU3 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SORCS3Q9UPU3 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.18■□□□□ 0.5
SORCS3Q9UPU3 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.18■□□□□ 0.5
SORCS3Q9UPU3 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SORCS3Q9UPU3 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.18■□□□□ 0.5
SORCS3Q9UPU3 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.18■□□□□ 0.5
SORCS3Q9UPU3 AC096734.2-201ENST00000562054 433 ntBASIC18.18■□□□□ 0.5
SORCS3Q9UPU3 AC025678.2-201ENST00000562061 970 ntBASIC18.18■□□□□ 0.5
SORCS3Q9UPU3 MIR4745-201ENST00000577608 62 ntBASIC18.18■□□□□ 0.5
SORCS3Q9UPU3 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SORCS3Q9UPU3 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SORCS3Q9UPU3 AC010507.1-201ENST00000633895 436 ntBASIC18.18■□□□□ 0.5
SORCS3Q9UPU3 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.18■□□□□ 0.5
SORCS3Q9UPU3 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.18■□□□□ 0.5
SORCS3Q9UPU3 AL499627.1-201ENST00000569373 2188 ntBASIC18.18■□□□□ 0.5
SORCS3Q9UPU3 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SORCS3Q9UPU3 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SORCS3Q9UPU3 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SORCS3Q9UPU3 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SORCS3Q9UPU3 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SORCS3Q9UPU3 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SORCS3Q9UPU3 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SORCS3Q9UPU3 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms