Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PARPBPQ9NWS1 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PARPBPQ9NWS1 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.5■□□□□ 0.07
PARPBPQ9NWS1 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PARPBPQ9NWS1 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.5■□□□□ 0.07
PARPBPQ9NWS1 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
PARPBPQ9NWS1 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.49■□□□□ 0.07
PARPBPQ9NWS1 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PARPBPQ9NWS1 AC009336.1-201ENST00000608941 1553 ntBASIC15.49■□□□□ 0.07
PARPBPQ9NWS1 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PARPBPQ9NWS1 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PARPBPQ9NWS1 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PARPBPQ9NWS1 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
PARPBPQ9NWS1 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
PARPBPQ9NWS1 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PARPBPQ9NWS1 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PARPBPQ9NWS1 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.49■□□□□ 0.07
PARPBPQ9NWS1 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.49■□□□□ 0.07
PARPBPQ9NWS1 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
PARPBPQ9NWS1 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PARPBPQ9NWS1 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PARPBPQ9NWS1 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.49■□□□□ 0.07
PARPBPQ9NWS1 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.49■□□□□ 0.07
PARPBPQ9NWS1 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PARPBPQ9NWS1 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PARPBPQ9NWS1 AKR1C7P-201ENST00000305623 895 ntBASIC15.49■□□□□ 0.07
PARPBPQ9NWS1 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
PARPBPQ9NWS1 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PARPBPQ9NWS1 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.49■□□□□ 0.07
PARPBPQ9NWS1 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
PARPBPQ9NWS1 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.49■□□□□ 0.07
PARPBPQ9NWS1 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.49■□□□□ 0.07
PARPBPQ9NWS1 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.49■□□□□ 0.07
PARPBPQ9NWS1 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.49■□□□□ 0.07
PARPBPQ9NWS1 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
PARPBPQ9NWS1 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PARPBPQ9NWS1 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PARPBPQ9NWS1 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
PARPBPQ9NWS1 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
PARPBPQ9NWS1 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
PARPBPQ9NWS1 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PARPBPQ9NWS1 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PARPBPQ9NWS1 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
PARPBPQ9NWS1 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PARPBPQ9NWS1 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.49■□□□□ 0.07
PARPBPQ9NWS1 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.48■□□□□ 0.07
PARPBPQ9NWS1 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PARPBPQ9NWS1 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PARPBPQ9NWS1 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.48■□□□□ 0.07
PARPBPQ9NWS1 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PARPBPQ9NWS1 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.48■□□□□ 0.07
PARPBPQ9NWS1 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PARPBPQ9NWS1 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.48■□□□□ 0.07
PARPBPQ9NWS1 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PARPBPQ9NWS1 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
PARPBPQ9NWS1 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
PARPBPQ9NWS1 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PARPBPQ9NWS1 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PARPBPQ9NWS1 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
PARPBPQ9NWS1 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PARPBPQ9NWS1 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PARPBPQ9NWS1 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PARPBPQ9NWS1 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PARPBPQ9NWS1 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PARPBPQ9NWS1 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PARPBPQ9NWS1 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
PARPBPQ9NWS1 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
PARPBPQ9NWS1 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
PARPBPQ9NWS1 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PARPBPQ9NWS1 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.48■□□□□ 0.07
PARPBPQ9NWS1 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PARPBPQ9NWS1 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PARPBPQ9NWS1 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.48■□□□□ 0.07
PARPBPQ9NWS1 FGFR3P6-201ENST00000457012 610 ntBASIC15.48■□□□□ 0.07
PARPBPQ9NWS1 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.48■□□□□ 0.07
PARPBPQ9NWS1 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.48■□□□□ 0.07
PARPBPQ9NWS1 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PARPBPQ9NWS1 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.48■□□□□ 0.07
PARPBPQ9NWS1 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.48■□□□□ 0.07
PARPBPQ9NWS1 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
PARPBPQ9NWS1 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PARPBPQ9NWS1 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PARPBPQ9NWS1 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PARPBPQ9NWS1 AC141586.5-201ENST00000624546 2050 ntBASIC15.48■□□□□ 0.07
PARPBPQ9NWS1 AL138688.1-201ENST00000624851 1594 ntBASIC15.48■□□□□ 0.07
PARPBPQ9NWS1 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
PARPBPQ9NWS1 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
PARPBPQ9NWS1 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.48■□□□□ 0.07
PARPBPQ9NWS1 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.47■□□□□ 0.07
PARPBPQ9NWS1 AC046185.3-201ENST00000623228 1824 ntBASIC15.47■□□□□ 0.07
PARPBPQ9NWS1 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
PARPBPQ9NWS1 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
PARPBPQ9NWS1 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PARPBPQ9NWS1 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PARPBPQ9NWS1 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PARPBPQ9NWS1 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PARPBPQ9NWS1 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
PARPBPQ9NWS1 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
PARPBPQ9NWS1 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PARPBPQ9NWS1 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms