Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.87■□□□□ 0.93
FOXD4L1Q9NU39 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXD4L1Q9NU39 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC20.87■□□□□ 0.93
FOXD4L1Q9NU39 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXD4L1Q9NU39 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.87■□□□□ 0.93
FOXD4L1Q9NU39 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.87■□□□□ 0.93
FOXD4L1Q9NU39 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC20.87■□□□□ 0.93
FOXD4L1Q9NU39 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXD4L1Q9NU39 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXD4L1Q9NU39 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXD4L1Q9NU39 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
FOXD4L1Q9NU39 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
FOXD4L1Q9NU39 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXD4L1Q9NU39 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
FOXD4L1Q9NU39 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXD4L1Q9NU39 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXD4L1Q9NU39 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
FOXD4L1Q9NU39 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXD4L1Q9NU39 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
FOXD4L1Q9NU39 MIR718-201ENST00000390190 70 ntBASIC20.87■□□□□ 0.93
FOXD4L1Q9NU39 PGGT1BP2-201ENST00000398621 1028 ntBASIC20.87■□□□□ 0.93
FOXD4L1Q9NU39 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.87■□□□□ 0.93
FOXD4L1Q9NU39 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.87■□□□□ 0.93
FOXD4L1Q9NU39 AC010834.3-201ENST00000520562 939 ntTSL 3 BASIC20.87■□□□□ 0.93
FOXD4L1Q9NU39 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC20.87■□□□□ 0.93
FOXD4L1Q9NU39 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.87■□□□□ 0.93
FOXD4L1Q9NU39 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.87■□□□□ 0.93
FOXD4L1Q9NU39 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.87■□□□□ 0.93
FOXD4L1Q9NU39 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
FOXD4L1Q9NU39 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC20.87■□□□□ 0.93
FOXD4L1Q9NU39 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
FOXD4L1Q9NU39 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXD4L1Q9NU39 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
FOXD4L1Q9NU39 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXD4L1Q9NU39 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXD4L1Q9NU39 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
FOXD4L1Q9NU39 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXD4L1Q9NU39 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
FOXD4L1Q9NU39 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXD4L1Q9NU39 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXD4L1Q9NU39 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
FOXD4L1Q9NU39 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXD4L1Q9NU39 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXD4L1Q9NU39 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXD4L1Q9NU39 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC20.86■□□□□ 0.93
FOXD4L1Q9NU39 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
FOXD4L1Q9NU39 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
FOXD4L1Q9NU39 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC20.86■□□□□ 0.93
FOXD4L1Q9NU39 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
FOXD4L1Q9NU39 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
FOXD4L1Q9NU39 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
FOXD4L1Q9NU39 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXD4L1Q9NU39 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
FOXD4L1Q9NU39 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXD4L1Q9NU39 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
FOXD4L1Q9NU39 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXD4L1Q9NU39 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.86■□□□□ 0.93
FOXD4L1Q9NU39 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
FOXD4L1Q9NU39 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC20.86■□□□□ 0.93
FOXD4L1Q9NU39 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.86■□□□□ 0.93
FOXD4L1Q9NU39 DDX43P3-201ENST00000441064 443 ntBASIC20.86■□□□□ 0.93
FOXD4L1Q9NU39 CNIH1-203ENST00000553660 785 ntTSL 2 BASIC20.86■□□□□ 0.93
FOXD4L1Q9NU39 GCSHP2-201ENST00000560971 527 ntBASIC20.86■□□□□ 0.93
FOXD4L1Q9NU39 NAPSB-206ENST00000562112 1266 ntBASIC20.86■□□□□ 0.93
FOXD4L1Q9NU39 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.86■□□□□ 0.93
FOXD4L1Q9NU39 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXD4L1Q9NU39 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.86■□□□□ 0.93
FOXD4L1Q9NU39 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
FOXD4L1Q9NU39 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
FOXD4L1Q9NU39 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXD4L1Q9NU39 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
FOXD4L1Q9NU39 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXD4L1Q9NU39 WT1-209ENST00000530998 2421 ntTSL 2 BASIC20.86■□□□□ 0.93
FOXD4L1Q9NU39 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC20.86■□□□□ 0.93
FOXD4L1Q9NU39 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXD4L1Q9NU39 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXD4L1Q9NU39 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXD4L1Q9NU39 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.85■□□□□ 0.93
FOXD4L1Q9NU39 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FOXD4L1Q9NU39 AC046185.3-201ENST00000623228 1824 ntBASIC20.85■□□□□ 0.93
FOXD4L1Q9NU39 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
FOXD4L1Q9NU39 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
FOXD4L1Q9NU39 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
FOXD4L1Q9NU39 RNF216P1-203ENST00000404404 2427 ntBASIC20.85■□□□□ 0.93
FOXD4L1Q9NU39 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.85■□□□□ 0.93
FOXD4L1Q9NU39 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FOXD4L1Q9NU39 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FOXD4L1Q9NU39 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FOXD4L1Q9NU39 AC092053.1-201ENST00000605787 1936 ntBASIC20.85■□□□□ 0.93
FOXD4L1Q9NU39 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FOXD4L1Q9NU39 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FOXD4L1Q9NU39 BX005214.2-201ENST00000423499 1077 ntTSL 5 BASIC20.85■□□□□ 0.93
FOXD4L1Q9NU39 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.85■□□□□ 0.93
FOXD4L1Q9NU39 AC096631.1-202ENST00000440162 917 ntTSL 2 BASIC20.85■□□□□ 0.93
FOXD4L1Q9NU39 AC114495.2-201ENST00000452686 437 ntBASIC20.85■□□□□ 0.93
FOXD4L1Q9NU39 CSNK1A1P3-201ENST00000504105 330 ntBASIC20.85■□□□□ 0.93
FOXD4L1Q9NU39 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC20.85■□□□□ 0.93
FOXD4L1Q9NU39 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.85■□□□□ 0.93
FOXD4L1Q9NU39 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.85■□□□□ 0.93
FOXD4L1Q9NU39 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms