Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.11■□□□□ 0.17
CTPS2Q9NRF8 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
CTPS2Q9NRF8 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CTPS2Q9NRF8 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CTPS2Q9NRF8 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CTPS2Q9NRF8 AP002383.4-201ENST00000442518 975 ntBASIC16.11■□□□□ 0.17
CTPS2Q9NRF8 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.11■□□□□ 0.17
CTPS2Q9NRF8 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CTPS2Q9NRF8 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CTPS2Q9NRF8 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CTPS2Q9NRF8 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CTPS2Q9NRF8 AL353801.3-201ENST00000609898 542 ntBASIC16.11■□□□□ 0.17
CTPS2Q9NRF8 AL139327.4-201ENST00000612362 153 ntBASIC16.11■□□□□ 0.17
CTPS2Q9NRF8 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.11■□□□□ 0.17
CTPS2Q9NRF8 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CTPS2Q9NRF8 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CTPS2Q9NRF8 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CTPS2Q9NRF8 AL121761.2-201ENST00000598007 1648 ntBASIC16.11■□□□□ 0.17
CTPS2Q9NRF8 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CTPS2Q9NRF8 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CTPS2Q9NRF8 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CTPS2Q9NRF8 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
CTPS2Q9NRF8 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CTPS2Q9NRF8 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CTPS2Q9NRF8 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CTPS2Q9NRF8 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.1■□□□□ 0.17
CTPS2Q9NRF8 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.1■□□□□ 0.17
CTPS2Q9NRF8 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
CTPS2Q9NRF8 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CTPS2Q9NRF8 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CTPS2Q9NRF8 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CTPS2Q9NRF8 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.1■□□□□ 0.17
CTPS2Q9NRF8 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.1■□□□□ 0.17
CTPS2Q9NRF8 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CTPS2Q9NRF8 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CTPS2Q9NRF8 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
CTPS2Q9NRF8 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CTPS2Q9NRF8 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CTPS2Q9NRF8 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.1■□□□□ 0.17
CTPS2Q9NRF8 AC096633.1-201ENST00000422446 749 ntBASIC16.1■□□□□ 0.17
CTPS2Q9NRF8 AC091607.1-201ENST00000490318 1060 ntBASIC16.1■□□□□ 0.17
CTPS2Q9NRF8 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CTPS2Q9NRF8 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.1■□□□□ 0.17
CTPS2Q9NRF8 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CTPS2Q9NRF8 AP002414.4-201ENST00000589764 1148 ntBASIC16.1■□□□□ 0.17
CTPS2Q9NRF8 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.1■□□□□ 0.17
CTPS2Q9NRF8 AC069148.1-201ENST00000608741 768 ntBASIC16.1■□□□□ 0.17
CTPS2Q9NRF8 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CTPS2Q9NRF8 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CTPS2Q9NRF8 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CTPS2Q9NRF8 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.1■□□□□ 0.17
CTPS2Q9NRF8 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CTPS2Q9NRF8 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.1■□□□□ 0.17
CTPS2Q9NRF8 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CTPS2Q9NRF8 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CTPS2Q9NRF8 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CTPS2Q9NRF8 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CTPS2Q9NRF8 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.1■□□□□ 0.17
CTPS2Q9NRF8 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CTPS2Q9NRF8 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
CTPS2Q9NRF8 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CTPS2Q9NRF8 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CTPS2Q9NRF8 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CTPS2Q9NRF8 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CTPS2Q9NRF8 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.09■□□□□ 0.17
CTPS2Q9NRF8 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CTPS2Q9NRF8 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CTPS2Q9NRF8 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
CTPS2Q9NRF8 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.09■□□□□ 0.17
CTPS2Q9NRF8 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CTPS2Q9NRF8 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.09■□□□□ 0.17
CTPS2Q9NRF8 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CTPS2Q9NRF8 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.09■□□□□ 0.17
CTPS2Q9NRF8 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.09■□□□□ 0.17
CTPS2Q9NRF8 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.09■□□□□ 0.17
CTPS2Q9NRF8 AC005336.2-201ENST00000593183 939 ntBASIC16.09■□□□□ 0.17
CTPS2Q9NRF8 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CTPS2Q9NRF8 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.09■□□□□ 0.17
CTPS2Q9NRF8 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.09■□□□□ 0.17
CTPS2Q9NRF8 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CTPS2Q9NRF8 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.09■□□□□ 0.17
CTPS2Q9NRF8 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CTPS2Q9NRF8 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.09■□□□□ 0.17
CTPS2Q9NRF8 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CTPS2Q9NRF8 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CTPS2Q9NRF8 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CTPS2Q9NRF8 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CTPS2Q9NRF8 AC016396.2-201ENST00000562575 1417 ntBASIC16.09■□□□□ 0.17
CTPS2Q9NRF8 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CTPS2Q9NRF8 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.09■□□□□ 0.17
CTPS2Q9NRF8 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CTPS2Q9NRF8 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CTPS2Q9NRF8 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CTPS2Q9NRF8 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CTPS2Q9NRF8 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.09■□□□□ 0.17
CTPS2Q9NRF8 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.09■□□□□ 0.17
CTPS2Q9NRF8 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CTPS2Q9NRF8 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.08■□□□□ 0.17
CTPS2Q9NRF8 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
CTPS2Q9NRF8 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms