Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH9Q9HC56 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH9Q9HC56 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
PCDH9Q9HC56 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH9Q9HC56 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
PCDH9Q9HC56 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH9Q9HC56 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH9Q9HC56 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH9Q9HC56 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDH9Q9HC56 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH9Q9HC56 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH9Q9HC56 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH9Q9HC56 FAM220CP-201ENST00000395253 831 ntBASIC17.85■□□□□ 0.45
PCDH9Q9HC56 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH9Q9HC56 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
PCDH9Q9HC56 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH9Q9HC56 POM121L3P-201ENST00000419331 1163 ntBASIC17.85■□□□□ 0.45
PCDH9Q9HC56 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
PCDH9Q9HC56 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDH9Q9HC56 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
PCDH9Q9HC56 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH9Q9HC56 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDH9Q9HC56 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
PCDH9Q9HC56 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.85■□□□□ 0.45
PCDH9Q9HC56 AC011467.2-201ENST00000598425 242 ntBASIC17.85■□□□□ 0.45
PCDH9Q9HC56 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH9Q9HC56 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH9Q9HC56 FLJ38576-201ENST00000623820 2459 ntBASIC17.85■□□□□ 0.45
PCDH9Q9HC56 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH9Q9HC56 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH9Q9HC56 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH9Q9HC56 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH9Q9HC56 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
PCDH9Q9HC56 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.85■□□□□ 0.45
PCDH9Q9HC56 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PCDH9Q9HC56 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
PCDH9Q9HC56 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH9Q9HC56 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH9Q9HC56 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDH9Q9HC56 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PCDH9Q9HC56 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH9Q9HC56 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH9Q9HC56 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH9Q9HC56 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH9Q9HC56 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDH9Q9HC56 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH9Q9HC56 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH9Q9HC56 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH9Q9HC56 AC103564.2-201ENST00000432853 1299 ntBASIC17.84■□□□□ 0.45
PCDH9Q9HC56 AC111152.3-201ENST00000569699 673 ntBASIC17.84■□□□□ 0.45
PCDH9Q9HC56 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.84■□□□□ 0.45
PCDH9Q9HC56 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH9Q9HC56 AC138894.3-201ENST00000603787 634 ntBASIC17.84■□□□□ 0.45
PCDH9Q9HC56 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDH9Q9HC56 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDH9Q9HC56 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDH9Q9HC56 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH9Q9HC56 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDH9Q9HC56 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH9Q9HC56 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH9Q9HC56 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDH9Q9HC56 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH9Q9HC56 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH9Q9HC56 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH9Q9HC56 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDH9Q9HC56 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDH9Q9HC56 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDH9Q9HC56 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDH9Q9HC56 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PCDH9Q9HC56 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.83■□□□□ 0.45
PCDH9Q9HC56 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
PCDH9Q9HC56 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDH9Q9HC56 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDH9Q9HC56 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDH9Q9HC56 TNRC18P3-201ENST00000441896 2691 ntBASIC17.83■□□□□ 0.44
PCDH9Q9HC56 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH9Q9HC56 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH9Q9HC56 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH9Q9HC56 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.83■□□□□ 0.44
PCDH9Q9HC56 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.83■□□□□ 0.44
PCDH9Q9HC56 NUS1P1-201ENST00000446295 882 ntBASIC17.83■□□□□ 0.44
PCDH9Q9HC56 KRT18P56-201ENST00000507275 550 ntBASIC17.83■□□□□ 0.44
PCDH9Q9HC56 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH9Q9HC56 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDH9Q9HC56 STK25P1-201ENST00000585406 838 ntBASIC17.83■□□□□ 0.44
PCDH9Q9HC56 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.83■□□□□ 0.44
PCDH9Q9HC56 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH9Q9HC56 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH9Q9HC56 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH9Q9HC56 PCDHA14-201ENST00000506751 2298 ntBASIC17.83■□□□□ 0.44
PCDH9Q9HC56 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.83■□□□□ 0.44
PCDH9Q9HC56 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH9Q9HC56 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH9Q9HC56 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH9Q9HC56 EGFEM1P-202ENST00000431685 1563 ntBASIC17.83■□□□□ 0.44
PCDH9Q9HC56 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH9Q9HC56 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDH9Q9HC56 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH9Q9HC56 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDH9Q9HC56 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms