Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH20Q9HBT6 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH20Q9HBT6 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CDH20Q9HBT6 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH20Q9HBT6 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH20Q9HBT6 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH20Q9HBT6 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH20Q9HBT6 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH20Q9HBT6 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH20Q9HBT6 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH20Q9HBT6 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH20Q9HBT6 LYSMD4-203ENST00000378904 2122 ntBASIC15.13■□□□□ 0.01
CDH20Q9HBT6 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH20Q9HBT6 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH20Q9HBT6 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH20Q9HBT6 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH20Q9HBT6 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.13■□□□□ 0.01
CDH20Q9HBT6 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CDH20Q9HBT6 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH20Q9HBT6 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH20Q9HBT6 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH20Q9HBT6 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
CDH20Q9HBT6 SPDYE21P-201ENST00000413323 827 ntBASIC15.13■□□□□ 0.01
CDH20Q9HBT6 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.13■□□□□ 0.01
CDH20Q9HBT6 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.13■□□□□ 0.01
CDH20Q9HBT6 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH20Q9HBT6 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.13■□□□□ 0.01
CDH20Q9HBT6 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH20Q9HBT6 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
CDH20Q9HBT6 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.13■□□□□ 0.01
CDH20Q9HBT6 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.13■□□□□ 0.01
CDH20Q9HBT6 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.13■□□□□ 0.01
CDH20Q9HBT6 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.13■□□□□ 0.01
CDH20Q9HBT6 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
CDH20Q9HBT6 AL139288.1-201ENST00000623748 933 ntBASIC15.13■□□□□ 0.01
CDH20Q9HBT6 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH20Q9HBT6 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH20Q9HBT6 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH20Q9HBT6 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH20Q9HBT6 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
CDH20Q9HBT6 AC079776.2-201ENST00000641154 1609 ntBASIC15.13■□□□□ 0.01
CDH20Q9HBT6 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.13■□□□□ 0.01
CDH20Q9HBT6 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH20Q9HBT6 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH20Q9HBT6 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH20Q9HBT6 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH20Q9HBT6 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH20Q9HBT6 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH20Q9HBT6 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH20Q9HBT6 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH20Q9HBT6 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.12■□□□□ 0.01
CDH20Q9HBT6 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH20Q9HBT6 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.12■□□□□ 0.01
CDH20Q9HBT6 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CDH20Q9HBT6 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH20Q9HBT6 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CDH20Q9HBT6 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.12■□□□□ 0.01
CDH20Q9HBT6 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.12■□□□□ 0.01
CDH20Q9HBT6 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDH20Q9HBT6 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CDH20Q9HBT6 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH20Q9HBT6 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CDH20Q9HBT6 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDH20Q9HBT6 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.12■□□□□ 0.01
CDH20Q9HBT6 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.12■□□□□ 0.01
CDH20Q9HBT6 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH20Q9HBT6 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH20Q9HBT6 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CDH20Q9HBT6 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH20Q9HBT6 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH20Q9HBT6 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDH20Q9HBT6 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH20Q9HBT6 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.12■□□□□ 0.01
CDH20Q9HBT6 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.12■□□□□ 0.01
CDH20Q9HBT6 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH20Q9HBT6 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CDH20Q9HBT6 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.12■□□□□ 0.01
CDH20Q9HBT6 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.12■□□□□ 0.01
CDH20Q9HBT6 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CDH20Q9HBT6 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
CDH20Q9HBT6 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDH20Q9HBT6 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CDH20Q9HBT6 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.12■□□□□ 0.01
CDH20Q9HBT6 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH20Q9HBT6 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH20Q9HBT6 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.12■□□□□ 0.01
CDH20Q9HBT6 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH20Q9HBT6 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CDH20Q9HBT6 AC141586.5-201ENST00000624546 2050 ntBASIC15.12■□□□□ 0.01
CDH20Q9HBT6 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.12■□□□□ 0.01
CDH20Q9HBT6 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH20Q9HBT6 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDH20Q9HBT6 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH20Q9HBT6 LINC00896-202ENST00000609602 2128 ntBASIC15.11■□□□□ 0.01
CDH20Q9HBT6 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH20Q9HBT6 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH20Q9HBT6 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH20Q9HBT6 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH20Q9HBT6 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDH20Q9HBT6 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms