Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
UPF2Q9HAU5 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC21.23■□□□□ 0.99
UPF2Q9HAU5 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
UPF2Q9HAU5 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC21.23■□□□□ 0.99
UPF2Q9HAU5 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC21.23■□□□□ 0.99
UPF2Q9HAU5 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
UPF2Q9HAU5 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC21.23■□□□□ 0.99
UPF2Q9HAU5 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
UPF2Q9HAU5 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
UPF2Q9HAU5 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
UPF2Q9HAU5 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC21.23■□□□□ 0.99
UPF2Q9HAU5 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
UPF2Q9HAU5 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC21.23■□□□□ 0.99
UPF2Q9HAU5 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
UPF2Q9HAU5 MYCLP1-201ENST00000372451 1075 ntBASIC21.23■□□□□ 0.99
UPF2Q9HAU5 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.23■□□□□ 0.99
UPF2Q9HAU5 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC21.23■□□□□ 0.99
UPF2Q9HAU5 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.23■□□□□ 0.99
UPF2Q9HAU5 ECEL1P2-202ENST00000465689 757 ntBASIC21.23■□□□□ 0.99
UPF2Q9HAU5 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.23■□□□□ 0.99
UPF2Q9HAU5 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC21.23■□□□□ 0.99
UPF2Q9HAU5 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
UPF2Q9HAU5 CYP2D8P-201ENST00000433633 1490 ntBASIC21.23■□□□□ 0.99
UPF2Q9HAU5 AC068587.6-202ENST00000641839 5619 ntBASIC21.23■□□□□ 0.99
UPF2Q9HAU5 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC21.23■□□□□ 0.99
UPF2Q9HAU5 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
UPF2Q9HAU5 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC21.23■□□□□ 0.99
UPF2Q9HAU5 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
UPF2Q9HAU5 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
UPF2Q9HAU5 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
UPF2Q9HAU5 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
UPF2Q9HAU5 RNF216P1-203ENST00000404404 2427 ntBASIC21.23■□□□□ 0.99
UPF2Q9HAU5 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
UPF2Q9HAU5 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
UPF2Q9HAU5 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
UPF2Q9HAU5 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC21.22■□□□□ 0.99
UPF2Q9HAU5 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
UPF2Q9HAU5 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC21.22■□□□□ 0.99
UPF2Q9HAU5 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC21.22■□□□□ 0.99
UPF2Q9HAU5 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
UPF2Q9HAU5 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
UPF2Q9HAU5 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
UPF2Q9HAU5 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
UPF2Q9HAU5 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
UPF2Q9HAU5 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
UPF2Q9HAU5 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
UPF2Q9HAU5 SLC25A1P3-201ENST00000395415 828 ntBASIC21.22■□□□□ 0.99
UPF2Q9HAU5 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.22■□□□□ 0.99
UPF2Q9HAU5 AC008550.1-201ENST00000511500 884 ntBASIC21.22■□□□□ 0.99
UPF2Q9HAU5 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.22■□□□□ 0.99
UPF2Q9HAU5 AL355075.4-201ENST00000554988 638 ntBASIC21.22■□□□□ 0.99
UPF2Q9HAU5 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
UPF2Q9HAU5 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
UPF2Q9HAU5 ANKRD20A8P-203ENST00000641373 517 ntBASIC21.22■□□□□ 0.99
UPF2Q9HAU5 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC21.22■□□□□ 0.99
UPF2Q9HAU5 AC078925.2-201ENST00000624013 1973 ntBASIC21.22■□□□□ 0.99
UPF2Q9HAU5 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
UPF2Q9HAU5 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
UPF2Q9HAU5 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
UPF2Q9HAU5 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC21.22■□□□□ 0.99
UPF2Q9HAU5 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC21.22■□□□□ 0.99
UPF2Q9HAU5 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC21.22■□□□□ 0.99
UPF2Q9HAU5 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
UPF2Q9HAU5 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
UPF2Q9HAU5 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
UPF2Q9HAU5 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
UPF2Q9HAU5 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
UPF2Q9HAU5 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
UPF2Q9HAU5 AL391807.1-203ENST00000604392 2365 ntBASIC21.22■□□□□ 0.99
UPF2Q9HAU5 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UPF2Q9HAU5 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UPF2Q9HAU5 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
UPF2Q9HAU5 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC21.21■□□□□ 0.99
UPF2Q9HAU5 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
UPF2Q9HAU5 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
UPF2Q9HAU5 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
UPF2Q9HAU5 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UPF2Q9HAU5 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
UPF2Q9HAU5 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UPF2Q9HAU5 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
UPF2Q9HAU5 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC21.21■□□□□ 0.99
UPF2Q9HAU5 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
UPF2Q9HAU5 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UPF2Q9HAU5 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UPF2Q9HAU5 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UPF2Q9HAU5 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.21■□□□□ 0.99
UPF2Q9HAU5 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UPF2Q9HAU5 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC21.21■□□□□ 0.99
UPF2Q9HAU5 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC21.21■□□□□ 0.99
UPF2Q9HAU5 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
UPF2Q9HAU5 AC096633.1-201ENST00000422446 749 ntBASIC21.21■□□□□ 0.99
UPF2Q9HAU5 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
UPF2Q9HAU5 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.21■□□□□ 0.99
UPF2Q9HAU5 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.21■□□□□ 0.99
UPF2Q9HAU5 AC124947.2-201ENST00000547118 1133 ntBASIC21.21■□□□□ 0.99
UPF2Q9HAU5 GCSHP2-201ENST00000560971 527 ntBASIC21.21■□□□□ 0.99
UPF2Q9HAU5 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.21■□□□□ 0.99
UPF2Q9HAU5 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
UPF2Q9HAU5 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC21.21■□□□□ 0.99
UPF2Q9HAU5 AC010947.1-201ENST00000623454 693 ntBASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms