Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.41■□□□□ 0.38
VPS11Q9H270 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
VPS11Q9H270 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VPS11Q9H270 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
VPS11Q9H270 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VPS11Q9H270 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VPS11Q9H270 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VPS11Q9H270 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VPS11Q9H270 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VPS11Q9H270 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.41■□□□□ 0.38
VPS11Q9H270 AC113347.1-201ENST00000413321 391 ntBASIC17.41■□□□□ 0.38
VPS11Q9H270 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.41■□□□□ 0.38
VPS11Q9H270 AC096633.1-201ENST00000422446 749 ntBASIC17.41■□□□□ 0.38
VPS11Q9H270 AC117947.1-201ENST00000427448 529 ntBASIC17.41■□□□□ 0.38
VPS11Q9H270 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VPS11Q9H270 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VPS11Q9H270 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.41■□□□□ 0.38
VPS11Q9H270 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.41■□□□□ 0.38
VPS11Q9H270 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.41■□□□□ 0.38
VPS11Q9H270 AC005332.3-201ENST00000589904 676 ntBASIC17.41■□□□□ 0.38
VPS11Q9H270 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.41■□□□□ 0.38
VPS11Q9H270 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
VPS11Q9H270 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VPS11Q9H270 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.41■□□□□ 0.38
VPS11Q9H270 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VPS11Q9H270 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VPS11Q9H270 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VPS11Q9H270 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
VPS11Q9H270 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VPS11Q9H270 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VPS11Q9H270 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VPS11Q9H270 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VPS11Q9H270 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VPS11Q9H270 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VPS11Q9H270 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.41■□□□□ 0.38
VPS11Q9H270 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
VPS11Q9H270 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
VPS11Q9H270 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
VPS11Q9H270 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VPS11Q9H270 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
VPS11Q9H270 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VPS11Q9H270 AC026691.1-201ENST00000602502 2017 ntBASIC17.4■□□□□ 0.38
VPS11Q9H270 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
VPS11Q9H270 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.4■□□□□ 0.38
VPS11Q9H270 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VPS11Q9H270 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
VPS11Q9H270 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VPS11Q9H270 TERF1P1-201ENST00000311003 1181 ntBASIC17.4■□□□□ 0.38
VPS11Q9H270 SLC25A1P3-201ENST00000395415 828 ntBASIC17.4■□□□□ 0.38
VPS11Q9H270 KRT18P38-201ENST00000449496 1282 ntBASIC17.4■□□□□ 0.38
VPS11Q9H270 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
VPS11Q9H270 AC002558.1-201ENST00000488906 803 ntBASIC17.4■□□□□ 0.38
VPS11Q9H270 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.4■□□□□ 0.38
VPS11Q9H270 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VPS11Q9H270 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VPS11Q9H270 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.4■□□□□ 0.38
VPS11Q9H270 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.4■□□□□ 0.38
VPS11Q9H270 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.4■□□□□ 0.38
VPS11Q9H270 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.4■□□□□ 0.38
VPS11Q9H270 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VPS11Q9H270 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VPS11Q9H270 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.4■□□□□ 0.38
VPS11Q9H270 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VPS11Q9H270 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.4■□□□□ 0.38
VPS11Q9H270 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.4■□□□□ 0.38
VPS11Q9H270 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VPS11Q9H270 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.4■□□□□ 0.38
VPS11Q9H270 AC010460.3-201ENST00000511359 1579 ntBASIC17.4■□□□□ 0.38
VPS11Q9H270 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.4■□□□□ 0.38
VPS11Q9H270 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
VPS11Q9H270 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
VPS11Q9H270 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.4■□□□□ 0.38
VPS11Q9H270 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
VPS11Q9H270 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
VPS11Q9H270 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
VPS11Q9H270 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VPS11Q9H270 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.39■□□□□ 0.37
VPS11Q9H270 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VPS11Q9H270 AC093525.9-201ENST00000624961 1746 ntBASIC17.39■□□□□ 0.37
VPS11Q9H270 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
VPS11Q9H270 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
VPS11Q9H270 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.39■□□□□ 0.37
VPS11Q9H270 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.39■□□□□ 0.37
VPS11Q9H270 HBZP1-201ENST00000354915 429 ntBASIC17.39■□□□□ 0.37
VPS11Q9H270 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
VPS11Q9H270 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.39■□□□□ 0.37
VPS11Q9H270 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.39■□□□□ 0.37
VPS11Q9H270 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.39■□□□□ 0.37
VPS11Q9H270 VENTXP5-201ENST00000523979 775 ntBASIC17.39■□□□□ 0.37
VPS11Q9H270 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
VPS11Q9H270 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.39■□□□□ 0.37
VPS11Q9H270 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
VPS11Q9H270 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VPS11Q9H270 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VPS11Q9H270 AC006449.5-201ENST00000610658 2098 ntBASIC17.39■□□□□ 0.37
VPS11Q9H270 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VPS11Q9H270 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
VPS11Q9H270 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VPS11Q9H270 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VPS11Q9H270 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms