Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 ENSA-206ENST00000361631 725 ntTSL 2 BASIC20.62■□□□□ 0.89
UPF3BQ9BZI7 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
UPF3BQ9BZI7 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.62■□□□□ 0.89
UPF3BQ9BZI7 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.62■□□□□ 0.89
UPF3BQ9BZI7 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.62■□□□□ 0.89
UPF3BQ9BZI7 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.62■□□□□ 0.89
UPF3BQ9BZI7 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.62■□□□□ 0.89
UPF3BQ9BZI7 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.62■□□□□ 0.89
UPF3BQ9BZI7 MIR3180-1-201ENST00000580374 94 ntBASIC20.62■□□□□ 0.89
UPF3BQ9BZI7 MIR3180-3-201ENST00000584616 94 ntBASIC20.62■□□□□ 0.89
UPF3BQ9BZI7 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.62■□□□□ 0.89
UPF3BQ9BZI7 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.62■□□□□ 0.89
UPF3BQ9BZI7 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
UPF3BQ9BZI7 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.62■□□□□ 0.89
UPF3BQ9BZI7 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
UPF3BQ9BZI7 AC009336.1-201ENST00000608941 1553 ntBASIC20.62■□□□□ 0.89
UPF3BQ9BZI7 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
UPF3BQ9BZI7 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
UPF3BQ9BZI7 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UPF3BQ9BZI7 NSUN5P1-202ENST00000421140 1535 ntBASIC20.62■□□□□ 0.89
UPF3BQ9BZI7 NSUN5P2-203ENST00000457352 1529 ntBASIC20.62■□□□□ 0.89
UPF3BQ9BZI7 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.62■□□□□ 0.89
UPF3BQ9BZI7 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UPF3BQ9BZI7 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UPF3BQ9BZI7 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC20.61■□□□□ 0.89
UPF3BQ9BZI7 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
UPF3BQ9BZI7 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
UPF3BQ9BZI7 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC20.61■□□□□ 0.89
UPF3BQ9BZI7 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
UPF3BQ9BZI7 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
UPF3BQ9BZI7 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
UPF3BQ9BZI7 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC20.61■□□□□ 0.89
UPF3BQ9BZI7 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
UPF3BQ9BZI7 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC20.61■□□□□ 0.89
UPF3BQ9BZI7 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
UPF3BQ9BZI7 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UPF3BQ9BZI7 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
UPF3BQ9BZI7 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.61■□□□□ 0.89
UPF3BQ9BZI7 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
UPF3BQ9BZI7 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.61■□□□□ 0.89
UPF3BQ9BZI7 KRT17P6-201ENST00000453795 1220 ntBASIC20.61■□□□□ 0.89
UPF3BQ9BZI7 AC096582.2-201ENST00000510860 516 ntBASIC20.61■□□□□ 0.89
UPF3BQ9BZI7 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.61■□□□□ 0.89
UPF3BQ9BZI7 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
UPF3BQ9BZI7 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
UPF3BQ9BZI7 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
UPF3BQ9BZI7 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC20.61■□□□□ 0.89
UPF3BQ9BZI7 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UPF3BQ9BZI7 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC20.61■□□□□ 0.89
UPF3BQ9BZI7 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
UPF3BQ9BZI7 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
UPF3BQ9BZI7 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
UPF3BQ9BZI7 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
UPF3BQ9BZI7 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.61■□□□□ 0.89
UPF3BQ9BZI7 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
UPF3BQ9BZI7 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
UPF3BQ9BZI7 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UPF3BQ9BZI7 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UPF3BQ9BZI7 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
UPF3BQ9BZI7 PCDHA14-201ENST00000506751 2298 ntBASIC20.6■□□□□ 0.89
UPF3BQ9BZI7 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
UPF3BQ9BZI7 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC20.6■□□□□ 0.89
UPF3BQ9BZI7 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UPF3BQ9BZI7 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
UPF3BQ9BZI7 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UPF3BQ9BZI7 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UPF3BQ9BZI7 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.6■□□□□ 0.89
UPF3BQ9BZI7 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
UPF3BQ9BZI7 RCN1P2-201ENST00000398357 915 ntBASIC20.6■□□□□ 0.89
UPF3BQ9BZI7 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
UPF3BQ9BZI7 IGHV3-47-201ENST00000425060 335 ntBASIC20.6■□□□□ 0.89
UPF3BQ9BZI7 MINOS1P3-201ENST00000457048 203 ntBASIC20.6■□□□□ 0.89
UPF3BQ9BZI7 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
UPF3BQ9BZI7 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
UPF3BQ9BZI7 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
UPF3BQ9BZI7 CLEC4GP1-201ENST00000596555 870 ntBASIC20.6■□□□□ 0.89
UPF3BQ9BZI7 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.6■□□□□ 0.89
UPF3BQ9BZI7 Z69720.1-201ENST00000601483 472 ntBASIC20.6■□□□□ 0.89
UPF3BQ9BZI7 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.6■□□□□ 0.89
UPF3BQ9BZI7 AD001527.2-201ENST00000622994 785 ntBASIC20.6■□□□□ 0.89
UPF3BQ9BZI7 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UPF3BQ9BZI7 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC20.6■□□□□ 0.89
UPF3BQ9BZI7 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
UPF3BQ9BZI7 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UPF3BQ9BZI7 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
UPF3BQ9BZI7 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
UPF3BQ9BZI7 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
UPF3BQ9BZI7 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
UPF3BQ9BZI7 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UPF3BQ9BZI7 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
UPF3BQ9BZI7 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
UPF3BQ9BZI7 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
UPF3BQ9BZI7 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
UPF3BQ9BZI7 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC20.59■□□□□ 0.89
UPF3BQ9BZI7 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UPF3BQ9BZI7 INTS4P1-201ENST00000438455 1935 ntBASIC20.59■□□□□ 0.89
UPF3BQ9BZI7 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
UPF3BQ9BZI7 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
UPF3BQ9BZI7 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
UPF3BQ9BZI7 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms