Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDH11XQ9BZA7 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC22.2■■□□□ 1.14
PCDH11XQ9BZA7 FAM207CP-201ENST00000443486 507 ntBASIC22.2■■□□□ 1.14
PCDH11XQ9BZA7 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC22.2■■□□□ 1.14
PCDH11XQ9BZA7 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC22.2■■□□□ 1.14
PCDH11XQ9BZA7 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC22.2■■□□□ 1.14
PCDH11XQ9BZA7 SLC25A39P2-201ENST00000537614 270 ntBASIC22.2■■□□□ 1.14
PCDH11XQ9BZA7 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDH11XQ9BZA7 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
PCDH11XQ9BZA7 AL031055.1-201ENST00000606362 631 ntBASIC22.2■■□□□ 1.14
PCDH11XQ9BZA7 MIR6080-201ENST00000617359 66 ntBASIC22.2■■□□□ 1.14
PCDH11XQ9BZA7 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDH11XQ9BZA7 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PCDH11XQ9BZA7 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDH11XQ9BZA7 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
PCDH11XQ9BZA7 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDH11XQ9BZA7 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PCDH11XQ9BZA7 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PCDH11XQ9BZA7 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC22.2■■□□□ 1.14
PCDH11XQ9BZA7 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDH11XQ9BZA7 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDH11XQ9BZA7 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDH11XQ9BZA7 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC22.19■■□□□ 1.14
PCDH11XQ9BZA7 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
PCDH11XQ9BZA7 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC22.19■■□□□ 1.14
PCDH11XQ9BZA7 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDH11XQ9BZA7 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC22.19■■□□□ 1.14
PCDH11XQ9BZA7 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
PCDH11XQ9BZA7 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDH11XQ9BZA7 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC22.19■■□□□ 1.14
PCDH11XQ9BZA7 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDH11XQ9BZA7 HNRNPA1P40-201ENST00000426371 1278 ntBASIC22.19■■□□□ 1.14
PCDH11XQ9BZA7 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC22.19■■□□□ 1.14
PCDH11XQ9BZA7 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
PCDH11XQ9BZA7 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC22.19■■□□□ 1.14
PCDH11XQ9BZA7 IGHV3-42-201ENST00000520410 361 ntBASIC22.19■■□□□ 1.14
PCDH11XQ9BZA7 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC22.19■■□□□ 1.14
PCDH11XQ9BZA7 AC091167.2-201ENST00000579581 588 ntBASIC22.19■■□□□ 1.14
PCDH11XQ9BZA7 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC22.19■■□□□ 1.14
PCDH11XQ9BZA7 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC22.19■■□□□ 1.14
PCDH11XQ9BZA7 AC008267.7-201ENST00000624570 1194 ntBASIC22.19■■□□□ 1.14
PCDH11XQ9BZA7 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PCDH11XQ9BZA7 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC22.19■■□□□ 1.14
PCDH11XQ9BZA7 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC22.19■■□□□ 1.14
PCDH11XQ9BZA7 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PCDH11XQ9BZA7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC22.19■■□□□ 1.14
PCDH11XQ9BZA7 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDH11XQ9BZA7 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
PCDH11XQ9BZA7 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDH11XQ9BZA7 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
PCDH11XQ9BZA7 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDH11XQ9BZA7 PPP6R2P1-201ENST00000450880 1275 ntBASIC22.18■■□□□ 1.14
PCDH11XQ9BZA7 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC22.18■■□□□ 1.14
PCDH11XQ9BZA7 SSH2-211ENST00000590153 570 ntTSL 4 BASIC22.18■■□□□ 1.14
PCDH11XQ9BZA7 AC012645.4-201ENST00000610691 1061 ntBASIC22.18■■□□□ 1.14
PCDH11XQ9BZA7 AL035252.4-201ENST00000624174 288 ntBASIC22.18■■□□□ 1.14
PCDH11XQ9BZA7 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC22.18■■□□□ 1.14
PCDH11XQ9BZA7 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC22.18■■□□□ 1.14
PCDH11XQ9BZA7 SLC22A20-204ENST00000530038 1673 ntBASIC22.18■■□□□ 1.14
PCDH11XQ9BZA7 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PCDH11XQ9BZA7 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDH11XQ9BZA7 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDH11XQ9BZA7 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDH11XQ9BZA7 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDH11XQ9BZA7 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDH11XQ9BZA7 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PCDH11XQ9BZA7 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDH11XQ9BZA7 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC22.17■■□□□ 1.14
PCDH11XQ9BZA7 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDH11XQ9BZA7 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
PCDH11XQ9BZA7 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
PCDH11XQ9BZA7 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
PCDH11XQ9BZA7 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC22.17■■□□□ 1.14
PCDH11XQ9BZA7 ALG1L8P-201ENST00000533887 760 ntBASIC22.17■■□□□ 1.14
PCDH11XQ9BZA7 AP000842.3-202ENST00000569238 1080 ntBASIC22.17■■□□□ 1.14
PCDH11XQ9BZA7 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC22.17■■□□□ 1.14
PCDH11XQ9BZA7 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDH11XQ9BZA7 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC22.17■■□□□ 1.14
PCDH11XQ9BZA7 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDH11XQ9BZA7 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC22.17■■□□□ 1.14
PCDH11XQ9BZA7 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
PCDH11XQ9BZA7 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
PCDH11XQ9BZA7 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDH11XQ9BZA7 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC22.17■■□□□ 1.14
PCDH11XQ9BZA7 NME9-203ENST00000383180 2133 ntTSL 2 BASIC22.16■■□□□ 1.14
PCDH11XQ9BZA7 BICD1-207ENST00000551848 1962 ntBASIC22.16■■□□□ 1.14
PCDH11XQ9BZA7 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PCDH11XQ9BZA7 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC22.16■■□□□ 1.14
PCDH11XQ9BZA7 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC22.16■■□□□ 1.14
PCDH11XQ9BZA7 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC22.16■■□□□ 1.14
PCDH11XQ9BZA7 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDH11XQ9BZA7 GNAS-203ENST00000306120 1878 ntBASIC22.16■■□□□ 1.14
PCDH11XQ9BZA7 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC22.16■■□□□ 1.14
PCDH11XQ9BZA7 METTL26-204ENST00000397665 558 ntTSL 2 BASIC22.16■■□□□ 1.14
PCDH11XQ9BZA7 AC005034.1-201ENST00000426657 489 ntBASIC22.16■■□□□ 1.14
PCDH11XQ9BZA7 CCDC74BP1-201ENST00000508880 1123 ntBASIC22.16■■□□□ 1.14
PCDH11XQ9BZA7 AC069120.2-201ENST00000524091 540 ntBASIC22.16■■□□□ 1.14
PCDH11XQ9BZA7 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC22.16■■□□□ 1.14
PCDH11XQ9BZA7 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC22.16■■□□□ 1.14
PCDH11XQ9BZA7 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms