Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.81■□□□□ 0.92
RTFDC1Q9BY42 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTFDC1Q9BY42 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RTFDC1Q9BY42 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RTFDC1Q9BY42 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTFDC1Q9BY42 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTFDC1Q9BY42 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RTFDC1Q9BY42 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTFDC1Q9BY42 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTFDC1Q9BY42 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RTFDC1Q9BY42 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RTFDC1Q9BY42 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTFDC1Q9BY42 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTFDC1Q9BY42 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RTFDC1Q9BY42 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC20.81■□□□□ 0.92
RTFDC1Q9BY42 RAC2-204ENST00000406508 893 ntTSL 5 BASIC20.81■□□□□ 0.92
RTFDC1Q9BY42 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC20.81■□□□□ 0.92
RTFDC1Q9BY42 TREML5P-201ENST00000421694 576 ntBASIC20.81■□□□□ 0.92
RTFDC1Q9BY42 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC20.81■□□□□ 0.92
RTFDC1Q9BY42 IGHV3-62-201ENST00000520057 340 ntBASIC20.81■□□□□ 0.92
RTFDC1Q9BY42 GATD1-206ENST00000526325 756 ntTSL 5 BASIC20.81■□□□□ 0.92
RTFDC1Q9BY42 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RTFDC1Q9BY42 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC20.81■□□□□ 0.92
RTFDC1Q9BY42 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTFDC1Q9BY42 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
RTFDC1Q9BY42 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RTFDC1Q9BY42 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTFDC1Q9BY42 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
RTFDC1Q9BY42 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTFDC1Q9BY42 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTFDC1Q9BY42 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RTFDC1Q9BY42 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.81■□□□□ 0.92
RTFDC1Q9BY42 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.81■□□□□ 0.92
RTFDC1Q9BY42 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTFDC1Q9BY42 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
RTFDC1Q9BY42 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
RTFDC1Q9BY42 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.8■□□□□ 0.92
RTFDC1Q9BY42 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC20.8■□□□□ 0.92
RTFDC1Q9BY42 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTFDC1Q9BY42 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RTFDC1Q9BY42 AC135050.7-201ENST00000624508 2218 ntBASIC20.8■□□□□ 0.92
RTFDC1Q9BY42 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RTFDC1Q9BY42 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RTFDC1Q9BY42 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC20.8■□□□□ 0.92
RTFDC1Q9BY42 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RTFDC1Q9BY42 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RTFDC1Q9BY42 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTFDC1Q9BY42 SPDYE7P-202ENST00000420373 878 ntBASIC20.8■□□□□ 0.92
RTFDC1Q9BY42 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTFDC1Q9BY42 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC20.8■□□□□ 0.92
RTFDC1Q9BY42 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTFDC1Q9BY42 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTFDC1Q9BY42 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RTFDC1Q9BY42 SLC25A39P2-201ENST00000537614 270 ntBASIC20.8■□□□□ 0.92
RTFDC1Q9BY42 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC20.8■□□□□ 0.92
RTFDC1Q9BY42 AC008761.3-201ENST00000624803 892 ntBASIC20.8■□□□□ 0.92
RTFDC1Q9BY42 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC20.8■□□□□ 0.92
RTFDC1Q9BY42 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20.8■□□□□ 0.92
RTFDC1Q9BY42 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
RTFDC1Q9BY42 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTFDC1Q9BY42 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RTFDC1Q9BY42 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTFDC1Q9BY42 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
RTFDC1Q9BY42 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTFDC1Q9BY42 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTFDC1Q9BY42 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RTFDC1Q9BY42 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.8■□□□□ 0.92
RTFDC1Q9BY42 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTFDC1Q9BY42 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTFDC1Q9BY42 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RTFDC1Q9BY42 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.79■□□□□ 0.92
RTFDC1Q9BY42 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.79■□□□□ 0.92
RTFDC1Q9BY42 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC20.79■□□□□ 0.92
RTFDC1Q9BY42 AC012569.1-201ENST00000591191 1524 ntBASIC20.79■□□□□ 0.92
RTFDC1Q9BY42 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RTFDC1Q9BY42 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTFDC1Q9BY42 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTFDC1Q9BY42 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.79■□□□□ 0.92
RTFDC1Q9BY42 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RTFDC1Q9BY42 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC20.79■□□□□ 0.92
RTFDC1Q9BY42 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RTFDC1Q9BY42 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
RTFDC1Q9BY42 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC20.79■□□□□ 0.92
RTFDC1Q9BY42 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.79■□□□□ 0.92
RTFDC1Q9BY42 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC20.79■□□□□ 0.92
RTFDC1Q9BY42 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RTFDC1Q9BY42 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC20.79■□□□□ 0.92
RTFDC1Q9BY42 LINC02560-201ENST00000596379 459 ntBASIC20.79■□□□□ 0.92
RTFDC1Q9BY42 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.79■□□□□ 0.92
RTFDC1Q9BY42 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RTFDC1Q9BY42 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RTFDC1Q9BY42 LINC00304-203ENST00000565008 1864 ntBASIC20.79■□□□□ 0.92
RTFDC1Q9BY42 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTFDC1Q9BY42 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.79■□□□□ 0.92
RTFDC1Q9BY42 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.79■□□□□ 0.92
RTFDC1Q9BY42 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.79■□□□□ 0.92
RTFDC1Q9BY42 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTFDC1Q9BY42 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC20.78■□□□□ 0.92
RTFDC1Q9BY42 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RTFDC1Q9BY42 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms