Protein–RNA interactions for Protein: Q9BV40

VAMP8, Vesicle-associated membrane protein 8, humanhuman

Predictions only

Length 100 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP8Q9BV40 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP8Q9BV40 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
VAMP8Q9BV40 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
VAMP8Q9BV40 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC12.62□□□□□ -0.39
VAMP8Q9BV40 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
VAMP8Q9BV40 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC12.62□□□□□ -0.39
VAMP8Q9BV40 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP8Q9BV40 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP8Q9BV40 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP8Q9BV40 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP8Q9BV40 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP8Q9BV40 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC12.62□□□□□ -0.39
VAMP8Q9BV40 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.62□□□□□ -0.39
VAMP8Q9BV40 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP8Q9BV40 AC006538.1-201ENST00000567905 1585 ntBASIC12.62□□□□□ -0.39
VAMP8Q9BV40 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP8Q9BV40 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
VAMP8Q9BV40 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP8Q9BV40 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP8Q9BV40 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC12.62□□□□□ -0.39
VAMP8Q9BV40 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP8Q9BV40 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC12.62□□□□□ -0.39
VAMP8Q9BV40 CFL2-205ENST00000555765 632 ntTSL 2 BASIC12.62□□□□□ -0.39
VAMP8Q9BV40 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC12.62□□□□□ -0.39
VAMP8Q9BV40 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP8Q9BV40 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP8Q9BV40 RER1-203ENST00000378513 3000 ntTSL 3 BASIC12.62□□□□□ -0.39
VAMP8Q9BV40 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP8Q9BV40 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP8Q9BV40 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP8Q9BV40 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC12.62□□□□□ -0.39
VAMP8Q9BV40 AL359183.1-201ENST00000623796 2132 ntBASIC12.62□□□□□ -0.39
VAMP8Q9BV40 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP8Q9BV40 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP8Q9BV40 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.62□□□□□ -0.39
VAMP8Q9BV40 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
VAMP8Q9BV40 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC12.62□□□□□ -0.39
VAMP8Q9BV40 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
VAMP8Q9BV40 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP8Q9BV40 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP8Q9BV40 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP8Q9BV40 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP8Q9BV40 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.62□□□□□ -0.39
VAMP8Q9BV40 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP8Q9BV40 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP8Q9BV40 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP8Q9BV40 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
VAMP8Q9BV40 KRT8P9-201ENST00000558927 1449 ntBASIC12.62□□□□□ -0.39
VAMP8Q9BV40 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP8Q9BV40 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP8Q9BV40 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP8Q9BV40 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP8Q9BV40 PGR-210ENST00000619228 3038 ntTSL 5 BASIC12.62□□□□□ -0.39
VAMP8Q9BV40 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VAMP8Q9BV40 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC12.61□□□□□ -0.39
VAMP8Q9BV40 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VAMP8Q9BV40 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VAMP8Q9BV40 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC12.61□□□□□ -0.39
VAMP8Q9BV40 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.61□□□□□ -0.39
VAMP8Q9BV40 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
VAMP8Q9BV40 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.61□□□□□ -0.39
VAMP8Q9BV40 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VAMP8Q9BV40 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC12.61□□□□□ -0.39
VAMP8Q9BV40 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
VAMP8Q9BV40 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.61□□□□□ -0.39
VAMP8Q9BV40 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
VAMP8Q9BV40 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
VAMP8Q9BV40 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VAMP8Q9BV40 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VAMP8Q9BV40 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC12.61□□□□□ -0.39
VAMP8Q9BV40 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VAMP8Q9BV40 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.61□□□□□ -0.39
VAMP8Q9BV40 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
VAMP8Q9BV40 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
VAMP8Q9BV40 AC046185.3-201ENST00000623228 1824 ntBASIC12.61□□□□□ -0.39
VAMP8Q9BV40 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VAMP8Q9BV40 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VAMP8Q9BV40 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VAMP8Q9BV40 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC12.61□□□□□ -0.39
VAMP8Q9BV40 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VAMP8Q9BV40 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC12.61□□□□□ -0.39
VAMP8Q9BV40 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC12.61□□□□□ -0.39
VAMP8Q9BV40 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VAMP8Q9BV40 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VAMP8Q9BV40 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VAMP8Q9BV40 BRWD1-AS2-201ENST00000603064 1028 ntBASIC12.61□□□□□ -0.39
VAMP8Q9BV40 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VAMP8Q9BV40 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
VAMP8Q9BV40 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
VAMP8Q9BV40 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
VAMP8Q9BV40 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
VAMP8Q9BV40 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VAMP8Q9BV40 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VAMP8Q9BV40 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VAMP8Q9BV40 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VAMP8Q9BV40 KRT8P33-201ENST00000508125 1423 ntBASIC12.61□□□□□ -0.39
VAMP8Q9BV40 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VAMP8Q9BV40 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.61□□□□□ -0.39
VAMP8Q9BV40 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
VAMP8Q9BV40 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms