Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLF1Q9BQI6 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SLF1Q9BQI6 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLF1Q9BQI6 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLF1Q9BQI6 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
SLF1Q9BQI6 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLF1Q9BQI6 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLF1Q9BQI6 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLF1Q9BQI6 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
SLF1Q9BQI6 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLF1Q9BQI6 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLF1Q9BQI6 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
SLF1Q9BQI6 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLF1Q9BQI6 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLF1Q9BQI6 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLF1Q9BQI6 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SLF1Q9BQI6 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC20.06■□□□□ 0.8
SLF1Q9BQI6 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.06■□□□□ 0.8
SLF1Q9BQI6 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLF1Q9BQI6 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC20.06■□□□□ 0.8
SLF1Q9BQI6 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLF1Q9BQI6 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLF1Q9BQI6 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLF1Q9BQI6 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
SLF1Q9BQI6 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLF1Q9BQI6 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLF1Q9BQI6 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLF1Q9BQI6 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLF1Q9BQI6 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLF1Q9BQI6 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.05■□□□□ 0.8
SLF1Q9BQI6 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLF1Q9BQI6 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.05■□□□□ 0.8
SLF1Q9BQI6 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLF1Q9BQI6 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLF1Q9BQI6 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLF1Q9BQI6 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLF1Q9BQI6 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLF1Q9BQI6 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLF1Q9BQI6 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SLF1Q9BQI6 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
SLF1Q9BQI6 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SLF1Q9BQI6 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC20.05■□□□□ 0.8
SLF1Q9BQI6 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SLF1Q9BQI6 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC20.05■□□□□ 0.8
SLF1Q9BQI6 RPS8P6-201ENST00000426177 609 ntBASIC20.05■□□□□ 0.8
SLF1Q9BQI6 CD63-210ENST00000550776 870 ntTSL 5 BASIC20.05■□□□□ 0.8
SLF1Q9BQI6 OR7E47P-204ENST00000575924 449 ntBASIC20.05■□□□□ 0.8
SLF1Q9BQI6 AP001160.2-201ENST00000596071 487 ntBASIC20.05■□□□□ 0.8
SLF1Q9BQI6 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC20.05■□□□□ 0.8
SLF1Q9BQI6 AL513190.1-201ENST00000621254 727 ntBASIC20.05■□□□□ 0.8
SLF1Q9BQI6 AC134684.3-201ENST00000641758 218 ntBASIC20.05■□□□□ 0.8
SLF1Q9BQI6 AL135999.2-201ENST00000622438 1686 ntBASIC20.05■□□□□ 0.8
SLF1Q9BQI6 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.05■□□□□ 0.8
SLF1Q9BQI6 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.05■□□□□ 0.8
SLF1Q9BQI6 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLF1Q9BQI6 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.05■□□□□ 0.8
SLF1Q9BQI6 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SLF1Q9BQI6 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.05■□□□□ 0.8
SLF1Q9BQI6 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
SLF1Q9BQI6 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLF1Q9BQI6 AL590787.1-201ENST00000568856 1315 ntBASIC20.04■□□□□ 0.8
SLF1Q9BQI6 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLF1Q9BQI6 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SLF1Q9BQI6 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SLF1Q9BQI6 AC012313.1-201ENST00000593393 3059 ntBASIC20.04■□□□□ 0.8
SLF1Q9BQI6 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLF1Q9BQI6 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLF1Q9BQI6 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC20.04■□□□□ 0.8
SLF1Q9BQI6 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLF1Q9BQI6 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SLF1Q9BQI6 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLF1Q9BQI6 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLF1Q9BQI6 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLF1Q9BQI6 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SLF1Q9BQI6 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLF1Q9BQI6 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLF1Q9BQI6 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC20.04■□□□□ 0.8
SLF1Q9BQI6 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC20.04■□□□□ 0.8
SLF1Q9BQI6 POLD4-207ENST00000531239 584 ntTSL 2 BASIC20.04■□□□□ 0.8
SLF1Q9BQI6 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC20.04■□□□□ 0.8
SLF1Q9BQI6 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLF1Q9BQI6 AL139327.4-201ENST00000612362 153 ntBASIC20.04■□□□□ 0.8
SLF1Q9BQI6 LINC01451-201ENST00000623792 534 ntBASIC20.04■□□□□ 0.8
SLF1Q9BQI6 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SLF1Q9BQI6 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLF1Q9BQI6 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLF1Q9BQI6 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLF1Q9BQI6 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC20.04■□□□□ 0.8
SLF1Q9BQI6 PI4KAP1-204ENST00000612579 1703 ntBASIC20.04■□□□□ 0.8
SLF1Q9BQI6 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.04■□□□□ 0.8
SLF1Q9BQI6 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
SLF1Q9BQI6 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLF1Q9BQI6 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLF1Q9BQI6 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLF1Q9BQI6 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.03■□□□□ 0.8
SLF1Q9BQI6 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLF1Q9BQI6 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLF1Q9BQI6 GNAS-203ENST00000306120 1878 ntBASIC20.03■□□□□ 0.8
SLF1Q9BQI6 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLF1Q9BQI6 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms