Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PKP4Q99569 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PKP4Q99569 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PKP4Q99569 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PKP4Q99569 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
PKP4Q99569 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PKP4Q99569 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.82■□□□□ 0.28
PKP4Q99569 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PKP4Q99569 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PKP4Q99569 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PKP4Q99569 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PKP4Q99569 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PKP4Q99569 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PKP4Q99569 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PKP4Q99569 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PKP4Q99569 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.81■□□□□ 0.28
PKP4Q99569 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.81■□□□□ 0.28
PKP4Q99569 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PKP4Q99569 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PKP4Q99569 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.81■□□□□ 0.28
PKP4Q99569 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.81■□□□□ 0.28
PKP4Q99569 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PKP4Q99569 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PKP4Q99569 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PKP4Q99569 ACTG1P4-201ENST00000425123 1122 ntBASIC16.81■□□□□ 0.28
PKP4Q99569 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PKP4Q99569 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.81■□□□□ 0.28
PKP4Q99569 AC021087.4-201ENST00000563761 564 ntBASIC16.81■□□□□ 0.28
PKP4Q99569 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.81■□□□□ 0.28
PKP4Q99569 MTDHP4-201ENST00000600287 670 ntBASIC16.81■□□□□ 0.28
PKP4Q99569 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.81■□□□□ 0.28
PKP4Q99569 AL691432.3-201ENST00000621860 400 ntBASIC16.81■□□□□ 0.28
PKP4Q99569 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PKP4Q99569 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PKP4Q99569 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PKP4Q99569 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.81■□□□□ 0.28
PKP4Q99569 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PKP4Q99569 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PKP4Q99569 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PKP4Q99569 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PKP4Q99569 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.81■□□□□ 0.28
PKP4Q99569 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
PKP4Q99569 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.81■□□□□ 0.28
PKP4Q99569 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PKP4Q99569 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PKP4Q99569 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PKP4Q99569 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.81■□□□□ 0.28
PKP4Q99569 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
PKP4Q99569 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PKP4Q99569 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PKP4Q99569 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PKP4Q99569 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PKP4Q99569 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PKP4Q99569 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PKP4Q99569 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PKP4Q99569 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PKP4Q99569 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PKP4Q99569 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
PKP4Q99569 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PKP4Q99569 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PKP4Q99569 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PKP4Q99569 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PKP4Q99569 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PKP4Q99569 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PKP4Q99569 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.8■□□□□ 0.28
PKP4Q99569 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PKP4Q99569 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PKP4Q99569 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PKP4Q99569 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.8■□□□□ 0.28
PKP4Q99569 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.8■□□□□ 0.28
PKP4Q99569 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.8■□□□□ 0.28
PKP4Q99569 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.8■□□□□ 0.28
PKP4Q99569 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.8■□□□□ 0.28
PKP4Q99569 AL121912.1-201ENST00000603683 238 ntBASIC16.8■□□□□ 0.28
PKP4Q99569 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PKP4Q99569 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PKP4Q99569 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PKP4Q99569 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.8■□□□□ 0.28
PKP4Q99569 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.8■□□□□ 0.28
PKP4Q99569 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PKP4Q99569 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.8■□□□□ 0.28
PKP4Q99569 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PKP4Q99569 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PKP4Q99569 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.79■□□□□ 0.28
PKP4Q99569 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
PKP4Q99569 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PKP4Q99569 LINC02012-201ENST00000608206 1725 ntBASIC16.79■□□□□ 0.28
PKP4Q99569 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.79■□□□□ 0.28
PKP4Q99569 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PKP4Q99569 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PKP4Q99569 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PKP4Q99569 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PKP4Q99569 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PKP4Q99569 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PKP4Q99569 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PKP4Q99569 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PKP4Q99569 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PKP4Q99569 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PKP4Q99569 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
PKP4Q99569 AC004870.1-201ENST00000315132 882 ntBASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms