Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
YME1L1Q96TA2 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.45■□□□□ 0.54
YME1L1Q96TA2 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.45■□□□□ 0.54
YME1L1Q96TA2 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.45■□□□□ 0.54
YME1L1Q96TA2 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
YME1L1Q96TA2 AC015922.1-201ENST00000421102 1152 ntBASIC18.45■□□□□ 0.54
YME1L1Q96TA2 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.45■□□□□ 0.54
YME1L1Q96TA2 AC125807.1-201ENST00000483097 614 ntBASIC18.45■□□□□ 0.54
YME1L1Q96TA2 TERF1P3-201ENST00000505638 1227 ntBASIC18.45■□□□□ 0.54
YME1L1Q96TA2 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.45■□□□□ 0.54
YME1L1Q96TA2 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.45■□□□□ 0.54
YME1L1Q96TA2 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.45■□□□□ 0.54
YME1L1Q96TA2 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.45■□□□□ 0.54
YME1L1Q96TA2 AC243562.1-201ENST00000560672 389 ntBASIC18.45■□□□□ 0.54
YME1L1Q96TA2 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.45■□□□□ 0.54
YME1L1Q96TA2 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.45■□□□□ 0.54
YME1L1Q96TA2 AP001059.3-201ENST00000619053 235 ntBASIC18.45■□□□□ 0.54
YME1L1Q96TA2 AL035252.4-201ENST00000624174 288 ntBASIC18.45■□□□□ 0.54
YME1L1Q96TA2 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
YME1L1Q96TA2 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.45■□□□□ 0.54
YME1L1Q96TA2 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
YME1L1Q96TA2 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
YME1L1Q96TA2 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.45■□□□□ 0.54
YME1L1Q96TA2 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
YME1L1Q96TA2 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
YME1L1Q96TA2 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
YME1L1Q96TA2 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
YME1L1Q96TA2 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
YME1L1Q96TA2 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
YME1L1Q96TA2 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
YME1L1Q96TA2 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
YME1L1Q96TA2 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
YME1L1Q96TA2 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.44■□□□□ 0.54
YME1L1Q96TA2 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
YME1L1Q96TA2 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
YME1L1Q96TA2 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
YME1L1Q96TA2 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
YME1L1Q96TA2 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
YME1L1Q96TA2 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
YME1L1Q96TA2 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.44■□□□□ 0.54
YME1L1Q96TA2 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.44■□□□□ 0.54
YME1L1Q96TA2 AC107890.1-201ENST00000422478 521 ntBASIC18.44■□□□□ 0.54
YME1L1Q96TA2 FAM58DP-201ENST00000428076 619 ntBASIC18.44■□□□□ 0.54
YME1L1Q96TA2 RBPMS2P1-201ENST00000437762 623 ntBASIC18.44■□□□□ 0.54
YME1L1Q96TA2 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC18.44■□□□□ 0.54
YME1L1Q96TA2 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.44■□□□□ 0.54
YME1L1Q96TA2 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
YME1L1Q96TA2 AL512356.2-201ENST00000546955 174 ntBASIC18.44■□□□□ 0.54
YME1L1Q96TA2 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
YME1L1Q96TA2 DUX4L17-201ENST00000557360 1267 ntBASIC18.44■□□□□ 0.54
YME1L1Q96TA2 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.44■□□□□ 0.54
YME1L1Q96TA2 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.44■□□□□ 0.54
YME1L1Q96TA2 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
YME1L1Q96TA2 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
YME1L1Q96TA2 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.44■□□□□ 0.54
YME1L1Q96TA2 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.44■□□□□ 0.54
YME1L1Q96TA2 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
YME1L1Q96TA2 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
YME1L1Q96TA2 AKAP8P1-201ENST00000434743 1349 ntBASIC18.44■□□□□ 0.54
YME1L1Q96TA2 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.44■□□□□ 0.54
YME1L1Q96TA2 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.44■□□□□ 0.54
YME1L1Q96TA2 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.44■□□□□ 0.54
YME1L1Q96TA2 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.44■□□□□ 0.54
YME1L1Q96TA2 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
YME1L1Q96TA2 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
YME1L1Q96TA2 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
YME1L1Q96TA2 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
YME1L1Q96TA2 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
YME1L1Q96TA2 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
YME1L1Q96TA2 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
YME1L1Q96TA2 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
YME1L1Q96TA2 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
YME1L1Q96TA2 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.43■□□□□ 0.54
YME1L1Q96TA2 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
YME1L1Q96TA2 AC236430.1-201ENST00000402231 743 ntBASIC18.43■□□□□ 0.54
YME1L1Q96TA2 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.43■□□□□ 0.54
YME1L1Q96TA2 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.43■□□□□ 0.54
YME1L1Q96TA2 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
YME1L1Q96TA2 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
YME1L1Q96TA2 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC18.43■□□□□ 0.54
YME1L1Q96TA2 IGHV3-62-201ENST00000520057 340 ntBASIC18.43■□□□□ 0.54
YME1L1Q96TA2 AC107918.2-201ENST00000530817 355 ntBASIC18.43■□□□□ 0.54
YME1L1Q96TA2 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.43■□□□□ 0.54
YME1L1Q96TA2 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.43■□□□□ 0.54
YME1L1Q96TA2 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.43■□□□□ 0.54
YME1L1Q96TA2 AC087641.1-201ENST00000557561 1021 ntBASIC18.43■□□□□ 0.54
YME1L1Q96TA2 MIR4515-201ENST00000584082 81 ntBASIC18.43■□□□□ 0.54
YME1L1Q96TA2 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.43■□□□□ 0.54
YME1L1Q96TA2 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
YME1L1Q96TA2 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
YME1L1Q96TA2 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
YME1L1Q96TA2 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
YME1L1Q96TA2 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
YME1L1Q96TA2 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
YME1L1Q96TA2 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.43■□□□□ 0.54
YME1L1Q96TA2 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
YME1L1Q96TA2 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.43■□□□□ 0.54
YME1L1Q96TA2 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.42■□□□□ 0.54
YME1L1Q96TA2 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.42■□□□□ 0.54
YME1L1Q96TA2 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms