Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 CROCCP2-202ENST00000412962 2773 ntBASIC17.8■□□□□ 0.44
RPRD1AQ96P16 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPRD1AQ96P16 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RPRD1AQ96P16 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RPRD1AQ96P16 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPRD1AQ96P16 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RPRD1AQ96P16 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RPRD1AQ96P16 LETM1P2-201ENST00000597330 2178 ntBASIC17.8■□□□□ 0.44
RPRD1AQ96P16 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
RPRD1AQ96P16 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPRD1AQ96P16 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RPRD1AQ96P16 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPRD1AQ96P16 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPRD1AQ96P16 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPRD1AQ96P16 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.79■□□□□ 0.44
RPRD1AQ96P16 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RPRD1AQ96P16 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RPRD1AQ96P16 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RPRD1AQ96P16 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
RPRD1AQ96P16 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.79■□□□□ 0.44
RPRD1AQ96P16 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPRD1AQ96P16 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.79■□□□□ 0.44
RPRD1AQ96P16 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPRD1AQ96P16 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPRD1AQ96P16 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RPRD1AQ96P16 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
RPRD1AQ96P16 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPRD1AQ96P16 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.79■□□□□ 0.44
RPRD1AQ96P16 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPRD1AQ96P16 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.79■□□□□ 0.44
RPRD1AQ96P16 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.79■□□□□ 0.44
RPRD1AQ96P16 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RPRD1AQ96P16 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.79■□□□□ 0.44
RPRD1AQ96P16 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RPRD1AQ96P16 PGM5P2-202ENST00000637225 1043 ntBASIC17.79■□□□□ 0.44
RPRD1AQ96P16 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPRD1AQ96P16 GPR89P-201ENST00000407924 1495 ntBASIC17.79■□□□□ 0.44
RPRD1AQ96P16 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
RPRD1AQ96P16 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.79■□□□□ 0.44
RPRD1AQ96P16 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RPRD1AQ96P16 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.79■□□□□ 0.44
RPRD1AQ96P16 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPRD1AQ96P16 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RPRD1AQ96P16 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RPRD1AQ96P16 PP12613-201ENST00000424958 2230 ntBASIC17.79■□□□□ 0.44
RPRD1AQ96P16 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPRD1AQ96P16 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPRD1AQ96P16 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.79■□□□□ 0.44
RPRD1AQ96P16 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.79■□□□□ 0.44
RPRD1AQ96P16 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.78■□□□□ 0.44
RPRD1AQ96P16 AL022342.1-201ENST00000400363 863 ntBASIC17.78■□□□□ 0.44
RPRD1AQ96P16 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.78■□□□□ 0.44
RPRD1AQ96P16 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPRD1AQ96P16 IGHV3-22-201ENST00000520721 359 ntBASIC17.78■□□□□ 0.44
RPRD1AQ96P16 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.78■□□□□ 0.44
RPRD1AQ96P16 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPRD1AQ96P16 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPRD1AQ96P16 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPRD1AQ96P16 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.78■□□□□ 0.44
RPRD1AQ96P16 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPRD1AQ96P16 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RPRD1AQ96P16 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPRD1AQ96P16 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPRD1AQ96P16 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.78■□□□□ 0.44
RPRD1AQ96P16 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.78■□□□□ 0.44
RPRD1AQ96P16 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPRD1AQ96P16 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.78■□□□□ 0.44
RPRD1AQ96P16 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPRD1AQ96P16 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RPRD1AQ96P16 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RPRD1AQ96P16 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RPRD1AQ96P16 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RPRD1AQ96P16 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RPRD1AQ96P16 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RPRD1AQ96P16 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RPRD1AQ96P16 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.77■□□□□ 0.44
RPRD1AQ96P16 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
RPRD1AQ96P16 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
RPRD1AQ96P16 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.77■□□□□ 0.44
RPRD1AQ96P16 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.77■□□□□ 0.44
RPRD1AQ96P16 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.77■□□□□ 0.44
RPRD1AQ96P16 RPL13AP23-201ENST00000480739 586 ntBASIC17.77■□□□□ 0.44
RPRD1AQ96P16 SLC25A1P1-201ENST00000528351 927 ntBASIC17.77■□□□□ 0.44
RPRD1AQ96P16 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RPRD1AQ96P16 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.77■□□□□ 0.44
RPRD1AQ96P16 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RPRD1AQ96P16 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
RPRD1AQ96P16 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RPRD1AQ96P16 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
RPRD1AQ96P16 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RPRD1AQ96P16 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.77■□□□□ 0.43
RPRD1AQ96P16 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.77■□□□□ 0.43
RPRD1AQ96P16 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RPRD1AQ96P16 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RPRD1AQ96P16 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
RPRD1AQ96P16 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.77■□□□□ 0.43
RPRD1AQ96P16 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RPRD1AQ96P16 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RPRD1AQ96P16 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RPRD1AQ96P16 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms