Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.5■□□□□ 0.23
SLC46A1Q96NT5 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC46A1Q96NT5 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.5■□□□□ 0.23
SLC46A1Q96NT5 AC093512.1-201ENST00000617969 520 ntBASIC16.5■□□□□ 0.23
SLC46A1Q96NT5 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC46A1Q96NT5 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC46A1Q96NT5 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC46A1Q96NT5 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC46A1Q96NT5 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC46A1Q96NT5 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.5■□□□□ 0.23
SLC46A1Q96NT5 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
SLC46A1Q96NT5 AC009336.1-201ENST00000608941 1553 ntBASIC16.5■□□□□ 0.23
SLC46A1Q96NT5 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SLC46A1Q96NT5 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.5■□□□□ 0.23
SLC46A1Q96NT5 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC46A1Q96NT5 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.5■□□□□ 0.23
SLC46A1Q96NT5 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.5■□□□□ 0.23
SLC46A1Q96NT5 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.5■□□□□ 0.23
SLC46A1Q96NT5 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC46A1Q96NT5 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC46A1Q96NT5 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.49■□□□□ 0.23
SLC46A1Q96NT5 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SLC46A1Q96NT5 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SLC46A1Q96NT5 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC46A1Q96NT5 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC46A1Q96NT5 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SLC46A1Q96NT5 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC46A1Q96NT5 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
SLC46A1Q96NT5 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
SLC46A1Q96NT5 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC46A1Q96NT5 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.49■□□□□ 0.23
SLC46A1Q96NT5 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC46A1Q96NT5 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.49■□□□□ 0.23
SLC46A1Q96NT5 BCRP1-201ENST00000444246 691 ntBASIC16.49■□□□□ 0.23
SLC46A1Q96NT5 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC46A1Q96NT5 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.49■□□□□ 0.23
SLC46A1Q96NT5 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.49■□□□□ 0.23
SLC46A1Q96NT5 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
SLC46A1Q96NT5 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC46A1Q96NT5 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
SLC46A1Q96NT5 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC46A1Q96NT5 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC46A1Q96NT5 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC46A1Q96NT5 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC46A1Q96NT5 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC46A1Q96NT5 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.49■□□□□ 0.23
SLC46A1Q96NT5 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC46A1Q96NT5 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
SLC46A1Q96NT5 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.49■□□□□ 0.23
SLC46A1Q96NT5 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC46A1Q96NT5 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC46A1Q96NT5 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC46A1Q96NT5 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC46A1Q96NT5 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC46A1Q96NT5 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SLC46A1Q96NT5 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SLC46A1Q96NT5 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC46A1Q96NT5 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC46A1Q96NT5 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC46A1Q96NT5 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.48■□□□□ 0.23
SLC46A1Q96NT5 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SLC46A1Q96NT5 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.48■□□□□ 0.23
SLC46A1Q96NT5 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC46A1Q96NT5 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC46A1Q96NT5 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.48■□□□□ 0.23
SLC46A1Q96NT5 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC46A1Q96NT5 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC46A1Q96NT5 CXCL1P1-201ENST00000502804 216 ntBASIC16.48■□□□□ 0.23
SLC46A1Q96NT5 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC46A1Q96NT5 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.48■□□□□ 0.23
SLC46A1Q96NT5 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC46A1Q96NT5 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.48■□□□□ 0.23
SLC46A1Q96NT5 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.48■□□□□ 0.23
SLC46A1Q96NT5 REXO1L3P-201ENST00000622202 1288 ntBASIC16.48■□□□□ 0.23
SLC46A1Q96NT5 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC46A1Q96NT5 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC46A1Q96NT5 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC46A1Q96NT5 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC46A1Q96NT5 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC46A1Q96NT5 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.48■□□□□ 0.23
SLC46A1Q96NT5 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC46A1Q96NT5 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC46A1Q96NT5 AL121761.2-201ENST00000598007 1648 ntBASIC16.48■□□□□ 0.23
SLC46A1Q96NT5 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
SLC46A1Q96NT5 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SLC46A1Q96NT5 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC46A1Q96NT5 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC46A1Q96NT5 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.48■□□□□ 0.23
SLC46A1Q96NT5 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC46A1Q96NT5 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC46A1Q96NT5 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC46A1Q96NT5 PI4KAP1-204ENST00000612579 1703 ntBASIC16.48■□□□□ 0.23
SLC46A1Q96NT5 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC46A1Q96NT5 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC46A1Q96NT5 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.47■□□□□ 0.23
SLC46A1Q96NT5 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.47■□□□□ 0.23
SLC46A1Q96NT5 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.47■□□□□ 0.23
SLC46A1Q96NT5 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC46A1Q96NT5 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC46A1Q96NT5 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms