Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SNX27Q96L92 AC010507.1-201ENST00000633895 436 ntBASIC18.57■□□□□ 0.56
SNX27Q96L92 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.57■□□□□ 0.56
SNX27Q96L92 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNX27Q96L92 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNX27Q96L92 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNX27Q96L92 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.57■□□□□ 0.56
SNX27Q96L92 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNX27Q96L92 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SNX27Q96L92 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.57■□□□□ 0.56
SNX27Q96L92 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNX27Q96L92 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNX27Q96L92 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
SNX27Q96L92 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNX27Q96L92 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNX27Q96L92 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SNX27Q96L92 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SNX27Q96L92 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
SNX27Q96L92 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNX27Q96L92 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SNX27Q96L92 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SNX27Q96L92 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.56■□□□□ 0.56
SNX27Q96L92 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNX27Q96L92 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SNX27Q96L92 AC023274.1-201ENST00000418278 595 ntBASIC18.56■□□□□ 0.56
SNX27Q96L92 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.56■□□□□ 0.56
SNX27Q96L92 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SNX27Q96L92 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.56■□□□□ 0.56
SNX27Q96L92 SLC25A6P2-201ENST00000497974 877 ntBASIC18.56■□□□□ 0.56
SNX27Q96L92 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.56■□□□□ 0.56
SNX27Q96L92 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.56■□□□□ 0.56
SNX27Q96L92 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNX27Q96L92 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNX27Q96L92 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SNX27Q96L92 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SNX27Q96L92 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNX27Q96L92 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SNX27Q96L92 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SNX27Q96L92 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.56■□□□□ 0.56
SNX27Q96L92 EGFEM1P-202ENST00000431685 1563 ntBASIC18.55■□□□□ 0.56
SNX27Q96L92 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SNX27Q96L92 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNX27Q96L92 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SNX27Q96L92 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
SNX27Q96L92 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SNX27Q96L92 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
SNX27Q96L92 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.55■□□□□ 0.56
SNX27Q96L92 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
SNX27Q96L92 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.55■□□□□ 0.56
SNX27Q96L92 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNX27Q96L92 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNX27Q96L92 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNX27Q96L92 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SNX27Q96L92 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
SNX27Q96L92 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
SNX27Q96L92 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.55■□□□□ 0.56
SNX27Q96L92 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.55■□□□□ 0.56
SNX27Q96L92 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SNX27Q96L92 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.55■□□□□ 0.56
SNX27Q96L92 AC002347.1-201ENST00000569543 541 ntBASIC18.55■□□□□ 0.56
SNX27Q96L92 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.55■□□□□ 0.56
SNX27Q96L92 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.55■□□□□ 0.56
SNX27Q96L92 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.55■□□□□ 0.56
SNX27Q96L92 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNX27Q96L92 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SNX27Q96L92 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SNX27Q96L92 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNX27Q96L92 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.55■□□□□ 0.56
SNX27Q96L92 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
SNX27Q96L92 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNX27Q96L92 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SNX27Q96L92 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
SNX27Q96L92 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNX27Q96L92 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SNX27Q96L92 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SNX27Q96L92 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNX27Q96L92 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNX27Q96L92 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.54■□□□□ 0.56
SNX27Q96L92 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
SNX27Q96L92 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SNX27Q96L92 AC116353.5-201ENST00000638148 1699 ntBASIC18.54■□□□□ 0.56
SNX27Q96L92 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.54■□□□□ 0.56
SNX27Q96L92 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SNX27Q96L92 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SNX27Q96L92 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.54■□□□□ 0.56
SNX27Q96L92 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNX27Q96L92 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.54■□□□□ 0.56
SNX27Q96L92 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
SNX27Q96L92 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.54■□□□□ 0.56
SNX27Q96L92 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNX27Q96L92 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNX27Q96L92 YBX2P1-201ENST00000394192 760 ntBASIC18.54■□□□□ 0.56
SNX27Q96L92 AC004832.2-201ENST00000426397 482 ntBASIC18.54■□□□□ 0.56
SNX27Q96L92 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SNX27Q96L92 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNX27Q96L92 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.54■□□□□ 0.56
SNX27Q96L92 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.54■□□□□ 0.56
SNX27Q96L92 AC190387.1-201ENST00000551683 408 ntBASIC18.54■□□□□ 0.56
SNX27Q96L92 AC096734.2-201ENST00000562054 433 ntBASIC18.54■□□□□ 0.56
SNX27Q96L92 AL008721.1-201ENST00000609964 604 ntBASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms