Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PGBD1Q96JS3 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC20.06■□□□□ 0.8
PGBD1Q96JS3 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PGBD1Q96JS3 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC20.06■□□□□ 0.8
PGBD1Q96JS3 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PGBD1Q96JS3 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PGBD1Q96JS3 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PGBD1Q96JS3 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
PGBD1Q96JS3 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PGBD1Q96JS3 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
PGBD1Q96JS3 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PGBD1Q96JS3 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PGBD1Q96JS3 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PGBD1Q96JS3 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.06■□□□□ 0.8
PGBD1Q96JS3 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.06■□□□□ 0.8
PGBD1Q96JS3 RBM17P3-201ENST00000417687 1192 ntBASIC20.06■□□□□ 0.8
PGBD1Q96JS3 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PGBD1Q96JS3 FAM197Y8-203ENST00000450145 560 ntBASIC20.06■□□□□ 0.8
PGBD1Q96JS3 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.06■□□□□ 0.8
PGBD1Q96JS3 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PGBD1Q96JS3 NKAPP1-205ENST00000585790 367 ntBASIC20.06■□□□□ 0.8
PGBD1Q96JS3 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PGBD1Q96JS3 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PGBD1Q96JS3 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.06■□□□□ 0.8
PGBD1Q96JS3 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC20.06■□□□□ 0.8
PGBD1Q96JS3 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC20.06■□□□□ 0.8
PGBD1Q96JS3 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
PGBD1Q96JS3 CA12-203ENST00000422263 2556 ntTSL 2 BASIC20.06■□□□□ 0.8
PGBD1Q96JS3 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PGBD1Q96JS3 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PGBD1Q96JS3 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
PGBD1Q96JS3 FUT8-AS1-201ENST00000621019 1521 ntBASIC20.06■□□□□ 0.8
PGBD1Q96JS3 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
PGBD1Q96JS3 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PGBD1Q96JS3 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PGBD1Q96JS3 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC20.06■□□□□ 0.8
PGBD1Q96JS3 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PGBD1Q96JS3 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC20.06■□□□□ 0.8
PGBD1Q96JS3 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PGBD1Q96JS3 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PGBD1Q96JS3 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PGBD1Q96JS3 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PGBD1Q96JS3 FLJ38576-201ENST00000623820 2459 ntBASIC20.05■□□□□ 0.8
PGBD1Q96JS3 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PGBD1Q96JS3 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC20.05■□□□□ 0.8
PGBD1Q96JS3 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.05■□□□□ 0.8
PGBD1Q96JS3 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PGBD1Q96JS3 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PGBD1Q96JS3 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PGBD1Q96JS3 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PGBD1Q96JS3 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PGBD1Q96JS3 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PGBD1Q96JS3 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PGBD1Q96JS3 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PGBD1Q96JS3 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PGBD1Q96JS3 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PGBD1Q96JS3 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.05■□□□□ 0.8
PGBD1Q96JS3 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PGBD1Q96JS3 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.05■□□□□ 0.8
PGBD1Q96JS3 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PGBD1Q96JS3 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PGBD1Q96JS3 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
PGBD1Q96JS3 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.05■□□□□ 0.8
PGBD1Q96JS3 SLC25A6P4-201ENST00000586535 553 ntBASIC20.05■□□□□ 0.8
PGBD1Q96JS3 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PGBD1Q96JS3 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PGBD1Q96JS3 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.05■□□□□ 0.8
PGBD1Q96JS3 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PGBD1Q96JS3 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PGBD1Q96JS3 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PGBD1Q96JS3 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.05■□□□□ 0.8
PGBD1Q96JS3 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PGBD1Q96JS3 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.05■□□□□ 0.8
PGBD1Q96JS3 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PGBD1Q96JS3 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PGBD1Q96JS3 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PGBD1Q96JS3 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PGBD1Q96JS3 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PGBD1Q96JS3 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC20.04■□□□□ 0.8
PGBD1Q96JS3 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PGBD1Q96JS3 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PGBD1Q96JS3 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PGBD1Q96JS3 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PGBD1Q96JS3 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PGBD1Q96JS3 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PGBD1Q96JS3 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PGBD1Q96JS3 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PGBD1Q96JS3 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
PGBD1Q96JS3 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PGBD1Q96JS3 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PGBD1Q96JS3 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PGBD1Q96JS3 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PGBD1Q96JS3 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.04■□□□□ 0.8
PGBD1Q96JS3 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.04■□□□□ 0.8
PGBD1Q96JS3 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.04■□□□□ 0.8
PGBD1Q96JS3 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.04■□□□□ 0.8
PGBD1Q96JS3 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PGBD1Q96JS3 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.04■□□□□ 0.8
PGBD1Q96JS3 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PGBD1Q96JS3 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms