Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM11Q96F44 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM11Q96F44 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM11Q96F44 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM11Q96F44 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM11Q96F44 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM11Q96F44 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM11Q96F44 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM11Q96F44 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM11Q96F44 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM11Q96F44 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM11Q96F44 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.27■□□□□ 0.52
TRIM11Q96F44 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM11Q96F44 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM11Q96F44 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM11Q96F44 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.27■□□□□ 0.52
TRIM11Q96F44 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.27■□□□□ 0.52
TRIM11Q96F44 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.27■□□□□ 0.52
TRIM11Q96F44 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM11Q96F44 ATP5G2P1-201ENST00000433580 426 ntBASIC18.27■□□□□ 0.52
TRIM11Q96F44 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.27■□□□□ 0.52
TRIM11Q96F44 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM11Q96F44 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.27■□□□□ 0.52
TRIM11Q96F44 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM11Q96F44 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM11Q96F44 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.27■□□□□ 0.52
TRIM11Q96F44 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.27■□□□□ 0.52
TRIM11Q96F44 AL358472.4-201ENST00000633140 710 ntBASIC18.27■□□□□ 0.52
TRIM11Q96F44 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.27■□□□□ 0.52
TRIM11Q96F44 AP000867.4-201ENST00000641616 219 ntBASIC18.27■□□□□ 0.52
TRIM11Q96F44 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
TRIM11Q96F44 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM11Q96F44 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM11Q96F44 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.51
TRIM11Q96F44 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM11Q96F44 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM11Q96F44 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.27■□□□□ 0.51
TRIM11Q96F44 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM11Q96F44 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM11Q96F44 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM11Q96F44 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM11Q96F44 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
TRIM11Q96F44 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM11Q96F44 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
TRIM11Q96F44 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM11Q96F44 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM11Q96F44 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.26■□□□□ 0.51
TRIM11Q96F44 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.26■□□□□ 0.51
TRIM11Q96F44 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.26■□□□□ 0.51
TRIM11Q96F44 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM11Q96F44 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.26■□□□□ 0.51
TRIM11Q96F44 AC105020.1-201ENST00000435356 2205 ntBASIC18.26■□□□□ 0.51
TRIM11Q96F44 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM11Q96F44 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.26■□□□□ 0.51
TRIM11Q96F44 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TRIM11Q96F44 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.26■□□□□ 0.51
TRIM11Q96F44 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TRIM11Q96F44 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.26■□□□□ 0.51
TRIM11Q96F44 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TRIM11Q96F44 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.26■□□□□ 0.51
TRIM11Q96F44 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.26■□□□□ 0.51
TRIM11Q96F44 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.26■□□□□ 0.51
TRIM11Q96F44 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.26■□□□□ 0.51
TRIM11Q96F44 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.26■□□□□ 0.51
TRIM11Q96F44 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.26■□□□□ 0.51
TRIM11Q96F44 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM11Q96F44 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM11Q96F44 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
TRIM11Q96F44 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
TRIM11Q96F44 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.26■□□□□ 0.51
TRIM11Q96F44 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM11Q96F44 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.26■□□□□ 0.51
TRIM11Q96F44 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TRIM11Q96F44 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM11Q96F44 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM11Q96F44 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM11Q96F44 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM11Q96F44 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM11Q96F44 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM11Q96F44 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM11Q96F44 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TRIM11Q96F44 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM11Q96F44 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM11Q96F44 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
TRIM11Q96F44 SPDYE21P-201ENST00000413323 827 ntBASIC18.25■□□□□ 0.51
TRIM11Q96F44 ACTG1P4-201ENST00000425123 1122 ntBASIC18.25■□□□□ 0.51
TRIM11Q96F44 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM11Q96F44 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM11Q96F44 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.25■□□□□ 0.51
TRIM11Q96F44 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.25■□□□□ 0.51
TRIM11Q96F44 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM11Q96F44 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM11Q96F44 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM11Q96F44 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TRIM11Q96F44 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM11Q96F44 AC106886.4-201ENST00000623557 2502 ntBASIC18.25■□□□□ 0.51
TRIM11Q96F44 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM11Q96F44 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM11Q96F44 AC005915.1-201ENST00000624912 2018 ntBASIC18.25■□□□□ 0.51
TRIM11Q96F44 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms