Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.46■□□□□ 0.23
LRRC58Q96CX6 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.46■□□□□ 0.23
LRRC58Q96CX6 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.46■□□□□ 0.23
LRRC58Q96CX6 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC58Q96CX6 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
LRRC58Q96CX6 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
LRRC58Q96CX6 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
LRRC58Q96CX6 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
LRRC58Q96CX6 KRT18P22-201ENST00000402024 1347 ntBASIC16.45■□□□□ 0.22
LRRC58Q96CX6 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC58Q96CX6 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.45■□□□□ 0.22
LRRC58Q96CX6 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
LRRC58Q96CX6 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC58Q96CX6 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.45■□□□□ 0.22
LRRC58Q96CX6 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC58Q96CX6 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC58Q96CX6 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
LRRC58Q96CX6 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC58Q96CX6 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.45■□□□□ 0.22
LRRC58Q96CX6 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC58Q96CX6 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
LRRC58Q96CX6 SPDYE15P-201ENST00000424157 909 ntBASIC16.45■□□□□ 0.22
LRRC58Q96CX6 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.45■□□□□ 0.22
LRRC58Q96CX6 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.45■□□□□ 0.22
LRRC58Q96CX6 ZNF444P1-201ENST00000559497 298 ntBASIC16.45■□□□□ 0.22
LRRC58Q96CX6 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.45■□□□□ 0.22
LRRC58Q96CX6 GPR32P1-201ENST00000601788 811 ntBASIC16.45■□□□□ 0.22
LRRC58Q96CX6 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC58Q96CX6 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC58Q96CX6 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC58Q96CX6 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
LRRC58Q96CX6 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.45■□□□□ 0.22
LRRC58Q96CX6 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC58Q96CX6 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC58Q96CX6 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
LRRC58Q96CX6 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC58Q96CX6 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC58Q96CX6 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC58Q96CX6 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC58Q96CX6 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
LRRC58Q96CX6 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.45■□□□□ 0.22
LRRC58Q96CX6 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC58Q96CX6 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
LRRC58Q96CX6 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
LRRC58Q96CX6 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC58Q96CX6 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC58Q96CX6 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
LRRC58Q96CX6 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC58Q96CX6 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC58Q96CX6 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC58Q96CX6 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC58Q96CX6 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC58Q96CX6 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
LRRC58Q96CX6 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
LRRC58Q96CX6 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC58Q96CX6 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC58Q96CX6 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC58Q96CX6 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC58Q96CX6 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC58Q96CX6 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC58Q96CX6 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC58Q96CX6 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.44■□□□□ 0.22
LRRC58Q96CX6 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC58Q96CX6 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.44■□□□□ 0.22
LRRC58Q96CX6 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC58Q96CX6 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC58Q96CX6 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.44■□□□□ 0.22
LRRC58Q96CX6 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC58Q96CX6 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.44■□□□□ 0.22
LRRC58Q96CX6 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC58Q96CX6 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC58Q96CX6 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.44■□□□□ 0.22
LRRC58Q96CX6 AL031432.5-201ENST00000641059 760 ntBASIC16.44■□□□□ 0.22
LRRC58Q96CX6 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
LRRC58Q96CX6 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC58Q96CX6 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.44■□□□□ 0.22
LRRC58Q96CX6 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC58Q96CX6 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.44■□□□□ 0.22
LRRC58Q96CX6 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.44■□□□□ 0.22
LRRC58Q96CX6 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC58Q96CX6 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
LRRC58Q96CX6 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC58Q96CX6 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC58Q96CX6 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC58Q96CX6 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC58Q96CX6 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC58Q96CX6 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
LRRC58Q96CX6 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.43■□□□□ 0.22
LRRC58Q96CX6 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC58Q96CX6 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC58Q96CX6 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.43■□□□□ 0.22
LRRC58Q96CX6 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC58Q96CX6 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.43■□□□□ 0.22
LRRC58Q96CX6 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC58Q96CX6 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC58Q96CX6 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
LRRC58Q96CX6 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC58Q96CX6 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC58Q96CX6 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC58Q96CX6 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms