Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HPS1Q92902 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HPS1Q92902 PAUPAR-201ENST00000630360 2965 ntBASIC15.88■□□□□ 0.13
HPS1Q92902 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HPS1Q92902 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
HPS1Q92902 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HPS1Q92902 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HPS1Q92902 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
HPS1Q92902 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HPS1Q92902 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HPS1Q92902 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HPS1Q92902 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.88■□□□□ 0.13
HPS1Q92902 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.88■□□□□ 0.13
HPS1Q92902 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.88■□□□□ 0.13
HPS1Q92902 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC15.88■□□□□ 0.13
HPS1Q92902 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC15.88■□□□□ 0.13
HPS1Q92902 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.88■□□□□ 0.13
HPS1Q92902 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC15.88■□□□□ 0.13
HPS1Q92902 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HPS1Q92902 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
HPS1Q92902 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
HPS1Q92902 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.88■□□□□ 0.13
HPS1Q92902 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HPS1Q92902 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
HPS1Q92902 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
HPS1Q92902 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HPS1Q92902 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
HPS1Q92902 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.88■□□□□ 0.13
HPS1Q92902 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
HPS1Q92902 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HPS1Q92902 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HPS1Q92902 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
HPS1Q92902 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.88■□□□□ 0.13
HPS1Q92902 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
HPS1Q92902 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HPS1Q92902 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
HPS1Q92902 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
HPS1Q92902 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HPS1Q92902 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15.87■□□□□ 0.13
HPS1Q92902 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
HPS1Q92902 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HPS1Q92902 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.87■□□□□ 0.13
HPS1Q92902 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HPS1Q92902 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.87■□□□□ 0.13
HPS1Q92902 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.87■□□□□ 0.13
HPS1Q92902 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC15.87■□□□□ 0.13
HPS1Q92902 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HPS1Q92902 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.87■□□□□ 0.13
HPS1Q92902 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
HPS1Q92902 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HPS1Q92902 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.87■□□□□ 0.13
HPS1Q92902 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HPS1Q92902 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
HPS1Q92902 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15.87■□□□□ 0.13
HPS1Q92902 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.87■□□□□ 0.13
HPS1Q92902 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HPS1Q92902 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.87■□□□□ 0.13
HPS1Q92902 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
HPS1Q92902 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.87■□□□□ 0.13
HPS1Q92902 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HPS1Q92902 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.87■□□□□ 0.13
HPS1Q92902 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HPS1Q92902 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HPS1Q92902 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HPS1Q92902 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HPS1Q92902 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.87■□□□□ 0.13
HPS1Q92902 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HPS1Q92902 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HPS1Q92902 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
HPS1Q92902 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.87■□□□□ 0.13
HPS1Q92902 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HPS1Q92902 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.87■□□□□ 0.13
HPS1Q92902 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
HPS1Q92902 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
HPS1Q92902 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
HPS1Q92902 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
HPS1Q92902 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
HPS1Q92902 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
HPS1Q92902 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.86■□□□□ 0.13
HPS1Q92902 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
HPS1Q92902 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HPS1Q92902 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HPS1Q92902 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC15.86■□□□□ 0.13
HPS1Q92902 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HPS1Q92902 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HPS1Q92902 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.86■□□□□ 0.13
HPS1Q92902 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
HPS1Q92902 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
HPS1Q92902 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
HPS1Q92902 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.86■□□□□ 0.13
HPS1Q92902 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HPS1Q92902 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
HPS1Q92902 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.86■□□□□ 0.13
HPS1Q92902 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC15.86■□□□□ 0.13
HPS1Q92902 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC15.86■□□□□ 0.13
HPS1Q92902 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC15.86■□□□□ 0.13
HPS1Q92902 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.86■□□□□ 0.13
HPS1Q92902 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
HPS1Q92902 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HPS1Q92902 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms