Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
RPGRQ92834 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RPGRQ92834 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RPGRQ92834 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RPGRQ92834 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.14■□□□□ 0.97
RPGRQ92834 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
RPGRQ92834 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RPGRQ92834 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RPGRQ92834 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RPGRQ92834 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RPGRQ92834 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPGRQ92834 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
RPGRQ92834 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RPGRQ92834 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPGRQ92834 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPGRQ92834 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
RPGRQ92834 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPGRQ92834 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPGRQ92834 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RPGRQ92834 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPGRQ92834 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.13■□□□□ 0.97
RPGRQ92834 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPGRQ92834 CENPM-205ENST00000404067 905 ntTSL 3 BASIC21.13■□□□□ 0.97
RPGRQ92834 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC21.13■□□□□ 0.97
RPGRQ92834 AC107890.1-201ENST00000422478 521 ntBASIC21.13■□□□□ 0.97
RPGRQ92834 AC244107.1-201ENST00000442033 332 ntBASIC21.13■□□□□ 0.97
RPGRQ92834 AC125807.1-201ENST00000483097 614 ntBASIC21.13■□□□□ 0.97
RPGRQ92834 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RPGRQ92834 PRR29-209ENST00000582540 967 ntTSL 2 BASIC21.13■□□□□ 0.97
RPGRQ92834 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC21.13■□□□□ 0.97
RPGRQ92834 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPGRQ92834 UXT-AS1-201ENST00000590504 1525 ntBASIC21.13■□□□□ 0.97
RPGRQ92834 AC012569.1-201ENST00000591191 1524 ntBASIC21.13■□□□□ 0.97
RPGRQ92834 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPGRQ92834 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPGRQ92834 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPGRQ92834 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC21.12■□□□□ 0.97
RPGRQ92834 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RPGRQ92834 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC21.12■□□□□ 0.97
RPGRQ92834 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC21.12■□□□□ 0.97
RPGRQ92834 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPGRQ92834 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC21.12■□□□□ 0.97
RPGRQ92834 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPGRQ92834 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
RPGRQ92834 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPGRQ92834 KLK8-202ENST00000320838 456 ntTSL 5 BASIC21.12■□□□□ 0.97
RPGRQ92834 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPGRQ92834 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
RPGRQ92834 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC21.12■□□□□ 0.97
RPGRQ92834 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.12■□□□□ 0.97
RPGRQ92834 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
RPGRQ92834 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RPGRQ92834 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC21.12■□□□□ 0.97
RPGRQ92834 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC21.12■□□□□ 0.97
RPGRQ92834 INO80E-210ENST00000567705 880 ntTSL 3 BASIC21.12■□□□□ 0.97
RPGRQ92834 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC21.12■□□□□ 0.97
RPGRQ92834 NAA60-208ENST00000570819 833 ntTSL 2 BASIC21.12■□□□□ 0.97
RPGRQ92834 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC21.12■□□□□ 0.97
RPGRQ92834 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPGRQ92834 AL009183.1-201ENST00000603760 355 ntBASIC21.12■□□□□ 0.97
RPGRQ92834 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC21.12■□□□□ 0.97
RPGRQ92834 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RPGRQ92834 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
RPGRQ92834 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.12■□□□□ 0.97
RPGRQ92834 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPGRQ92834 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RPGRQ92834 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC21.12■□□□□ 0.97
RPGRQ92834 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.12■□□□□ 0.97
RPGRQ92834 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPGRQ92834 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC21.12■□□□□ 0.97
RPGRQ92834 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
RPGRQ92834 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPGRQ92834 LYSMD4-203ENST00000378904 2122 ntBASIC21.11■□□□□ 0.97
RPGRQ92834 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RPGRQ92834 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.11■□□□□ 0.97
RPGRQ92834 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RPGRQ92834 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RPGRQ92834 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
RPGRQ92834 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RPGRQ92834 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RPGRQ92834 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RPGRQ92834 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RPGRQ92834 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RPGRQ92834 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RPGRQ92834 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC21.11■□□□□ 0.97
RPGRQ92834 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RPGRQ92834 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC21.11■□□□□ 0.97
RPGRQ92834 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RPGRQ92834 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
RPGRQ92834 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC21.11■□□□□ 0.97
RPGRQ92834 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC21.11■□□□□ 0.97
RPGRQ92834 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC21.11■□□□□ 0.97
RPGRQ92834 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
RPGRQ92834 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC21.11■□□□□ 0.97
RPGRQ92834 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC21.11■□□□□ 0.97
RPGRQ92834 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
RPGRQ92834 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RPGRQ92834 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RPGRQ92834 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
RPGRQ92834 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms