Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC22.47■■□□□ 1.19
RTF1Q92541 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RTF1Q92541 AC055717.3-201ENST00000622967 595 ntBASIC22.47■■□□□ 1.19
RTF1Q92541 AC004877.2-201ENST00000623941 599 ntBASIC22.47■■□□□ 1.19
RTF1Q92541 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RTF1Q92541 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
RTF1Q92541 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RTF1Q92541 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RTF1Q92541 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RTF1Q92541 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
RTF1Q92541 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC22.47■■□□□ 1.19
RTF1Q92541 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RTF1Q92541 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RTF1Q92541 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC22.47■■□□□ 1.19
RTF1Q92541 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC22.47■■□□□ 1.19
RTF1Q92541 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RTF1Q92541 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC22.47■■□□□ 1.19
RTF1Q92541 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC22.46■■□□□ 1.19
RTF1Q92541 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RTF1Q92541 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RTF1Q92541 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
RTF1Q92541 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
RTF1Q92541 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC22.46■■□□□ 1.19
RTF1Q92541 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
RTF1Q92541 AC087163.2-201ENST00000457299 853 ntBASIC22.46■■□□□ 1.19
RTF1Q92541 CXCL1P1-201ENST00000502804 216 ntBASIC22.46■■□□□ 1.19
RTF1Q92541 DHDH-204ENST00000523250 634 ntTSL 5 BASIC22.46■■□□□ 1.19
RTF1Q92541 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC22.46■■□□□ 1.19
RTF1Q92541 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC22.46■■□□□ 1.19
RTF1Q92541 AQP6-205ENST00000618286 829 ntTSL 5 BASIC22.46■■□□□ 1.19
RTF1Q92541 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RTF1Q92541 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC22.46■■□□□ 1.19
RTF1Q92541 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
RTF1Q92541 BCAR1-209ENST00000546196 1340 ntBASIC22.46■■□□□ 1.19
RTF1Q92541 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC22.46■■□□□ 1.19
RTF1Q92541 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
RTF1Q92541 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RTF1Q92541 PC-214ENST00000628663 1470 ntTSL 5 BASIC22.46■■□□□ 1.19
RTF1Q92541 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RTF1Q92541 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RTF1Q92541 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RTF1Q92541 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
RTF1Q92541 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
RTF1Q92541 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
RTF1Q92541 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RTF1Q92541 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC22.45■■□□□ 1.18
RTF1Q92541 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC22.45■■□□□ 1.18
RTF1Q92541 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RTF1Q92541 RHOQP3-201ENST00000437982 621 ntBASIC22.45■■□□□ 1.18
RTF1Q92541 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC22.45■■□□□ 1.18
RTF1Q92541 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC22.45■■□□□ 1.18
RTF1Q92541 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC22.45■■□□□ 1.18
RTF1Q92541 AC007064.4-201ENST00000637740 555 ntBASIC22.45■■□□□ 1.18
RTF1Q92541 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RTF1Q92541 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RTF1Q92541 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC22.45■■□□□ 1.18
RTF1Q92541 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
RTF1Q92541 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RTF1Q92541 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
RTF1Q92541 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RTF1Q92541 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC22.44■■□□□ 1.18
RTF1Q92541 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
RTF1Q92541 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RTF1Q92541 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC22.44■■□□□ 1.18
RTF1Q92541 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC22.44■■□□□ 1.18
RTF1Q92541 COA5-202ENST00000409997 557 ntTSL 4 BASIC22.44■■□□□ 1.18
RTF1Q92541 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC22.44■■□□□ 1.18
RTF1Q92541 SLC25A6P2-201ENST00000497974 877 ntBASIC22.44■■□□□ 1.18
RTF1Q92541 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC22.44■■□□□ 1.18
RTF1Q92541 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RTF1Q92541 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RTF1Q92541 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC22.44■■□□□ 1.18
RTF1Q92541 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC22.44■■□□□ 1.18
RTF1Q92541 AL691403.2-201ENST00000618460 490 ntBASIC22.44■■□□□ 1.18
RTF1Q92541 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
RTF1Q92541 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC22.44■■□□□ 1.18
RTF1Q92541 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC22.44■■□□□ 1.18
RTF1Q92541 EML3-217ENST00000531557 2509 ntTSL 5 BASIC22.43■■□□□ 1.18
RTF1Q92541 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RTF1Q92541 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC22.43■■□□□ 1.18
RTF1Q92541 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RTF1Q92541 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RTF1Q92541 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC22.43■■□□□ 1.18
RTF1Q92541 AC016396.2-201ENST00000562575 1417 ntBASIC22.43■■□□□ 1.18
RTF1Q92541 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RTF1Q92541 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RTF1Q92541 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
RTF1Q92541 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RTF1Q92541 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC22.43■■□□□ 1.18
RTF1Q92541 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC22.43■■□□□ 1.18
RTF1Q92541 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC22.43■■□□□ 1.18
RTF1Q92541 KRT19P2-202ENST00000557173 1012 ntBASIC22.43■■□□□ 1.18
RTF1Q92541 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC22.43■■□□□ 1.18
RTF1Q92541 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC22.43■■□□□ 1.18
RTF1Q92541 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC22.43■■□□□ 1.18
RTF1Q92541 AC023141.13-201ENST00000604991 943 ntBASIC22.43■■□□□ 1.18
RTF1Q92541 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RTF1Q92541 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC22.43■■□□□ 1.18
RTF1Q92541 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RTF1Q92541 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms