Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 GLI3-203ENST00000437480 451 ntTSL 2 BASIC14.79□□□□□ -0.04
SMIM4Q8WVI0 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.79□□□□□ -0.04
SMIM4Q8WVI0 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC14.79□□□□□ -0.04
SMIM4Q8WVI0 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
SMIM4Q8WVI0 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC14.79□□□□□ -0.04
SMIM4Q8WVI0 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC14.79□□□□□ -0.04
SMIM4Q8WVI0 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SMIM4Q8WVI0 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
SMIM4Q8WVI0 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SMIM4Q8WVI0 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SMIM4Q8WVI0 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMIM4Q8WVI0 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.79□□□□□ -0.04
SMIM4Q8WVI0 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SMIM4Q8WVI0 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.78□□□□□ -0.04
SMIM4Q8WVI0 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.78□□□□□ -0.04
SMIM4Q8WVI0 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMIM4Q8WVI0 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMIM4Q8WVI0 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
SMIM4Q8WVI0 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.78□□□□□ -0.04
SMIM4Q8WVI0 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SMIM4Q8WVI0 EGFEM1P-202ENST00000431685 1563 ntBASIC14.78□□□□□ -0.04
SMIM4Q8WVI0 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SMIM4Q8WVI0 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMIM4Q8WVI0 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
SMIM4Q8WVI0 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SMIM4Q8WVI0 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC14.78□□□□□ -0.04
SMIM4Q8WVI0 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SMIM4Q8WVI0 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMIM4Q8WVI0 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMIM4Q8WVI0 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SMIM4Q8WVI0 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMIM4Q8WVI0 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMIM4Q8WVI0 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC14.78□□□□□ -0.04
SMIM4Q8WVI0 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC14.78□□□□□ -0.04
SMIM4Q8WVI0 SAPCD2P4-201ENST00000424595 1171 ntBASIC14.78□□□□□ -0.04
SMIM4Q8WVI0 NUDT16P1-203ENST00000513809 620 ntBASIC14.78□□□□□ -0.04
SMIM4Q8WVI0 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
SMIM4Q8WVI0 CD177P1-201ENST00000606252 935 ntBASIC14.78□□□□□ -0.04
SMIM4Q8WVI0 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMIM4Q8WVI0 AC126177.1-201ENST00000547829 2218 ntBASIC14.78□□□□□ -0.04
SMIM4Q8WVI0 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMIM4Q8WVI0 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMIM4Q8WVI0 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SMIM4Q8WVI0 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SMIM4Q8WVI0 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMIM4Q8WVI0 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMIM4Q8WVI0 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC14.78□□□□□ -0.04
SMIM4Q8WVI0 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMIM4Q8WVI0 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
SMIM4Q8WVI0 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMIM4Q8WVI0 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.77□□□□□ -0.04
SMIM4Q8WVI0 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.77□□□□□ -0.04
SMIM4Q8WVI0 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
SMIM4Q8WVI0 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
SMIM4Q8WVI0 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SMIM4Q8WVI0 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.77□□□□□ -0.04
SMIM4Q8WVI0 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SMIM4Q8WVI0 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
SMIM4Q8WVI0 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SMIM4Q8WVI0 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.77□□□□□ -0.04
SMIM4Q8WVI0 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
SMIM4Q8WVI0 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC14.77□□□□□ -0.04
SMIM4Q8WVI0 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SMIM4Q8WVI0 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
SMIM4Q8WVI0 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC14.77□□□□□ -0.05
SMIM4Q8WVI0 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
SMIM4Q8WVI0 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC14.77□□□□□ -0.05
SMIM4Q8WVI0 PARL-206ENST00000435888 1098 ntTSL 5 BASIC14.77□□□□□ -0.05
SMIM4Q8WVI0 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
SMIM4Q8WVI0 AP002490.2-201ENST00000524791 560 ntBASIC14.77□□□□□ -0.05
SMIM4Q8WVI0 TK2-204ENST00000525974 1178 ntTSL 2 BASIC14.77□□□□□ -0.05
SMIM4Q8WVI0 AP005242.2-201ENST00000580065 1175 ntBASIC14.77□□□□□ -0.05
SMIM4Q8WVI0 MIR3917-201ENST00000580971 93 ntBASIC14.77□□□□□ -0.05
SMIM4Q8WVI0 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SMIM4Q8WVI0 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SMIM4Q8WVI0 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.77□□□□□ -0.05
SMIM4Q8WVI0 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SMIM4Q8WVI0 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SMIM4Q8WVI0 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SMIM4Q8WVI0 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SMIM4Q8WVI0 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SMIM4Q8WVI0 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.77□□□□□ -0.05
SMIM4Q8WVI0 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
SMIM4Q8WVI0 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SMIM4Q8WVI0 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SMIM4Q8WVI0 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SMIM4Q8WVI0 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SMIM4Q8WVI0 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SMIM4Q8WVI0 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SMIM4Q8WVI0 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SMIM4Q8WVI0 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SMIM4Q8WVI0 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.76□□□□□ -0.05
SMIM4Q8WVI0 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SMIM4Q8WVI0 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.76□□□□□ -0.05
SMIM4Q8WVI0 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
SMIM4Q8WVI0 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SMIM4Q8WVI0 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SMIM4Q8WVI0 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SMIM4Q8WVI0 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.76□□□□□ -0.05
SMIM4Q8WVI0 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms